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PORTNAME= viennarna
DISTVERSION= 2.4.17
CATEGORIES= biology
MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/
DISTNAME= ViennaRNA-${DISTVERSION}
MAINTAINER= yuri@FreeBSD.org
COMMENT= Alignment tools for the structural analysis of RNA
LICENSE= ViennaRNALicense
LICENSE_NAME= Vienna RNA License
LICENSE_FILE= ${WRKSRC}/COPYING
LICENSE_PERMS= auto-accept dist-mirror pkg-mirror
BUILD_DEPENDS= bash:shells/bash \
libgd>0:graphics/gd # for the static lib
LIB_DEPENDS= libgmp.so:math/gmp \
libgsl.so:math/gsl \
libmpfr.so:math/mpfr
USES= autoreconf compiler:c++11-lang gmake libtool localbase perl5 pkgconfig xorg # w/out autoreconf -lstdc++ is present in configure and Makefiles and this causes link failure
USE_XORG= x11 xext # only for build
GNU_CONFIGURE= yes
CONFIGURE_SHELL= ${PREFIX}/bin/bash
CONFIGURE_ARGS= --enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl
INFO= RNAlib
DATASDIR= ${PREFIX}/share/ViennaRNA
DOCSDIR= ${PREFIX}/share/doc/ViennaRNA
EXAMPLESDIR= ${PREFIX}/share/examples/ViennaRNA
OPTIONS_DEFINE= DOCS EXAMPLES
PORTDOCS= *
PORTEXAMPLES= *
.include <bsd.port.mk>
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