blob: ef0fd1bd2539e90334f32286ec8c9f43b09f9b79 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
|
PORTNAME= pbbam
DISTVERSION= 0.18.0 # Test with biology/unanimity before upgrading!
PORTREVISION= 5
CATEGORIES= biology
# As of March 2018, unanimity is no longer open source.
# See https://github.com/PacificBiosciences/ccs.
MAINTAINER= ports@FreeBSD.org
COMMENT= PacBio BAM C++ library, with SWIG bindings
LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
LIB_DEPENDS= libhts.so:biology/htslib \
libboost_regex.so:devel/boost-libs
# Meson needs BOOST_ROOT=${LOCALBASE}
# https://github.com/mesonbuild/meson/issues/2239
USES= compiler:c++14-lang localbase meson pkgconfig python
USE_LDCONFIG= yes
USE_GITHUB= yes
GH_ACCOUNT= PacificBiosciences
pre-configure:
@${REINPLACE_CMD} -e "s|'python'|'${PYTHON_VERSION}'|g" \
${WRKSRC}/meson.build
post-install:
${RLN} ${STAGEDIR}${PREFIX}/lib/libpbbam.so.${PORTVERSION} \
${STAGEDIR}${PREFIX}/lib/libpbbam.so.0.18
${RLN} ${STAGEDIR}${PREFIX}/lib/libpbbam.so.${PORTVERSION} \
${STAGEDIR}${PREFIX}/lib/libpbbam.so.0
.include <bsd.port.mk>
|
