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# Created by: Reed A. Cartwright <cartwright@asu.edu>
PORTNAME= htslib
DISTVERSION= 1.13
CATEGORIES= biology devel
# Github generated distfiles are incomplete, so use custom tarball
MASTER_SITES= https://github.com/samtools/htslib/releases/download/${DISTVERSION}/
MAINTAINER= jwb@FreeBSD.org
COMMENT= C library for high-throughput sequencing data formats
LICENSE= BSD3CLAUSE MIT
LICENSE_COMB= multi
LICENSE_FILE= ${WRKSRC}/LICENSE
LIB_DEPENDS= libdeflate.so:archivers/libdeflate
TEST_DEPENDS= bash:shells/bash
USES= autoreconf cpe gmake localbase pathfix perl5 shebangfix tar:bzip2
USE_PERL5= test
USE_LDCONFIG= yes
GNU_CONFIGURE= yes
PATHFIX_MAKEFILEIN= Makefile
SHEBANG_FILES= test/*.pl
OPTIONS_DEFINE= CURL
OPTIONS_DEFAULT= CURL
CURL_DESC= Use libcurl for network file access (HTTPS and S3 support).
CURL_USES= ssl
CURL_LIB_DEPENDS= libcurl.so:ftp/curl
CURL_CONFIGURE_ENABLE= libcurl
PLIST_SUB= PORTVERSION="${PORTVERSION}"
TEST_TARGET= test
.include <bsd.port.mk>
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