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AgeCommit message (Expand)Author
2018-06-25New port: biology/igv: Visualization tool for genomic datasetsYuri Victorovich
2018-06-25Mark as broken on aarch64.Mark Linimon
2018-06-25- Update to 5.17.0Wen Heping
2018-06-23biology/phyml: update to v3.3.20180621Fernando Apesteguía
2018-06-23Update math/gsl to 2.5Tobias C. Berner
2018-06-22biology/ngs-sdk: Update 2.9.0 -> 2.9.1Yuri Victorovich
2018-06-22Mark these ports as broken on aarch64.Mark Linimon
2018-06-21Mark as broken on aarch64, and, where appropriate, armvX.Mark Linimon
2018-06-20Use PY_FLAVOR for dependencies.Mathieu Arnold
2018-06-18Mark as broken on powerpc64 pending fix for PR 199603.Mark Linimon
2018-06-18Adjust USES to fix builds on gcc-based architectures.Mark Linimon
2018-06-18Mark ports broken on powerpc64, categories a-c.Mark Linimon
2018-06-16biology/bedtools: Fix Makefile to respect PREFIXJason W. Bacon
2018-06-14New port: biology/py-orange3-bioinformatics: Orange add-on providing common f...Yuri Victorovich
2018-06-13biology/py-Genesis-PyAPI: Remove stray USES=fortranYuri Victorovich
2018-06-13New port: biology/py-Genesis-PyAPI: API for the Genesis platform for genetics...Yuri Victorovich
2018-06-11biology/artemis: Update 9 -> 17.0.1-11Yuri Victorovich
2018-06-10New port: biology/ngs-sdk: Tools and libraries for using data in the INSDC Se...Yuri Victorovich
2018-06-07Remove expired ports:Rene Ladan
2018-06-06Update to 2.0.0 and pass maintainership to committer.Kirill Ponomarev
2018-06-06Add new port: biology/infernalKirill Ponomarev
2018-06-03Mark as broken on powerpc64. The entire, unhelpful, error message is:Mark Linimon
2018-06-02Adjust USES to fix building on gcc-based archs (in particular, powerpc64).Mark Linimon
2018-05-27Update WWWSunpoet Po-Chuan Hsieh
2018-05-22biology/hyphy: Update to version 2.3.13Joseph Mingrone
2018-05-21biology/clustal-omega: Multiple alignment of nucleic acid and protein, replac...Jason W. Bacon
2018-05-21biology/clustalx: Multiple alignment of nucleic acid and protein sequences wi...Jason W. Bacon
2018-05-21biology/clustalw: Fix license, take maintainershipJason W. Bacon
2018-05-20biolog/molden: unbreak after at least two intransparent distfile updatesJohannes M Dieterich
2018-05-16biology/fastx-toolkit: Fix build on FreeBSD 12Jason W. Bacon
2018-05-15Add upstream patch to fix the build with Qt 5.10.Raphael Kubo da Costa
2018-05-15- Update to 3.3.20180214Wen Heping
2018-05-14biology/diamond: Update to version 0.9.22Joseph Mingrone
2018-05-14biology/hyphy: Bump PORTREVISION after upstream rerolled releaseJoseph Mingrone
2018-05-13biology/py-biopython: Unbreak on python3; Add licenseYuri Victorovich
2018-05-11biology/iqtree: Update to version 1.6.5Joseph Mingrone
2018-05-11New port, biology/hyphy: Hypothesis testing using PhylogeniesJoseph Mingrone
2018-05-07Mark BROKEN: checksum and size mismatchAntoine Brodin
2018-05-05Deprecate ports broken for more than 6 monthsAntoine Brodin
2018-04-30biology/iqtree: Update to version 1.6.4Joseph Mingrone
2018-04-26biology/paml: Set PORTVERSION directlyJoseph Mingrone
2018-04-26biology/canu: Upgrade to 1.7 releaseJason W. Bacon
2018-04-25biology/paml: Update to version 4.9hJoseph Mingrone
2018-04-25Switch all pypi.python.org WWWs to a new PyPi home pypi.org whereDmitry Marakasov
2018-04-24biology/unanimity: Pacific Biosciences consensus library and applicationsJason W. Bacon
2018-04-24biology/seaview: Update version 4.6.3=>4.6.5Muhammad Moinur Rahman
2018-04-23biology/pbcopper: Core C++ library for Pacific Biosciences toolsJason W. Bacon
2018-04-23biology/pbbam: PacBio BAM C++ library, with SWIG bindingsJason W. Bacon
2018-04-21biology/pbseqan: Pacific Biosciences patched and stripped down SeqAnJason W. Bacon
2018-04-20biology/diamond: Update to version 0.9.21Joseph Mingrone
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