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AgeCommit message (Expand)Author
2016-06-24- Add missing dependency, fixing buildDmitry Marakasov
2016-06-21- Switch to options helpersDmitry Marakasov
2016-06-17biology/diamond: update to 0.8.6Ruslan Makhmatkhanov
2016-06-11- Fix run-time dependency issuesOlivier Duchateau
2016-06-10biology/seaview: Update version 4.5.4.8=>4.6Muhammad Moinur Rahman
2016-06-09Update to 0.8.5Matthew Seaman
2016-06-08- Update to 1.35Wen Heping
2016-06-06Remove unneeded usage of:Mathieu Arnold
2016-06-03Deprecate ports broken for more than 6 monthsAntoine Brodin
2016-05-27- Do install cmake and pkgconfig modulesDmitry Marakasov
2016-05-26biology/{htslib|samtools|bcftools}: 1.3 -> 1.3.1Kurt Jaeger
2016-05-25Remove useless WRKSRC definitions.Mathieu Arnold
2016-05-19- Fix trailing whitespace in pkg-messagesDmitry Marakasov
2016-05-19- Fix trailing whitespace in pkg-descrs, categories [a-f]*Dmitry Marakasov
2016-05-18Fix DEPENDSAntoine Brodin
2016-05-16- Convert to USES=mysqlDmitry Marakasov
2016-05-16- Update to 4.9aDmitry Marakasov
2016-05-13biology/bowtie2: 2.2.7 -> 2.2.8Kurt Jaeger
2016-05-13Prevent collision with getline(3)Baptiste Daroussin
2016-05-13Prevent collision with getline(3)Baptiste Daroussin
2016-05-11Prevent collision with getline(3)Baptiste Daroussin
2016-05-10biology/seqan: update 1.3.1 -> 2.1.1Jason Unovitch
2016-05-10New port: biology/seqan-appsJason Unovitch
2016-05-09Add final slash in WWW entryOlivier Duchateau
2016-05-09The BIOM file format (canonically pronounced biome) is designed to be aOlivier Duchateau
2016-05-07During the exp-run in bug 208158, it was found that biology/ugene givesDimitry Andric
2016-05-06DNA query sequences against a protein reference database (BLASTP and BLASTXWen Heping
2016-05-01- Update to 1.14.8Danilo Egea Gondolfo
2016-04-22biology/seqtools: 4.41.1 -> 4.42.1Kurt Jaeger
2016-04-21many ports: mark broken on powerpc64Steve Wills
2016-04-17- Switch to options helpersDmitry Marakasov
2016-04-17- Update to 1.66Wen Heping
2016-04-16- Switch to options helpersDmitry Marakasov
2016-04-16Upgrade from 5.12.0 to 5.13.0. Release-announcement available here:Mikhail Teterin
2016-04-14Update to version 1.22.0, which now unfortunately requires Qt 5.x. AlsoAlexey Dokuchaev
2016-04-10- Add LICENSEDmitry Marakasov
2016-04-01Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.Mathieu Arnold
2016-03-31- Update to 1.5.0Dmitry Marakasov
2016-03-29- Use more appropriate BROKEN instead of IGNOREDmitry Marakasov
2016-03-27- Update to 5.12.0Wen Heping
2016-03-24- Clarify LICENSEDmitry Marakasov
2016-03-24Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.Dmitry Marakasov
2016-03-23New port: biology/bowtie2.Raphael Kubo da Costa
2016-03-23New port: biology/slclust.Raphael Kubo da Costa
2016-03-17Trimmomatic performs a variety of useful trimming tasks for illuminaWen Heping
2016-03-16New port: biology/p5-transdecoderKurt Jaeger
2016-03-14biology/seqtools: 4.40.0 -> 4.41.1Kurt Jaeger
2016-03-08Always set the DEFAULT github DISTFILE with .tar.gz for EXTRACT_SUFX.Mathieu Arnold
2016-03-05New port: biology/bowtie.Raphael Kubo da Costa
2016-02-26New port: biology/vcftools.Raphael Kubo da Costa
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