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2022-07-06biology/ngs-sdk: Revert: Un-remove, ngs was moved into sra-toolsYuri Victorovich
2022-07-06biology/gcta: Use bundled version of eigen3Yuri Victorovich
2022-07-06biology/ngs-sdk: Remove, ngs was moved into sra-toolsYuri Victorovich
2022-07-03biology/py-mrcfile: Update 1.3.0 -> 1.4.0Yuri Victorovich
2022-06-30devel/grpc: Update to 1.47.0Po-Chuan Hsieh
2022-06-29Fix CONFLICTS_INSTALL in benchmarks and biologyStefan Eßer
2022-06-24biology/seqan3: Update 3.1.0 -> 3.2.0Yuri Victorovich
2022-06-19biology/biosig: Update 2.4.1 -> 2.4.2Yuri Victorovich
2022-06-19biology/mopac: Move to science/mopac; Add TIMESTAMP to distinfo; Take maintai...Yuri Victorovich
2022-06-16*/*: Replace science/szip with science/libaecPo-Chuan Hsieh
2022-06-11biology/vcf2hap: Update to 0.1.6Jason W. Bacon
2022-06-11biology/peak-classifier: Update to 0.1.4Jason W. Bacon
2022-06-11biology/ad2vcf: Update to 0.1.6Jason W. Bacon
2022-06-11biology/vcf-split: Update to 0.1.5Jason W. Bacon
2022-06-11biology/biolibc-tools: Update to 0.1.3Jason W. Bacon
2022-06-11biology/biolibc: Update to 0.2.3Jason W. Bacon
2022-06-08biology/taxonkit: Update 0.11.1 -> 0.12.0Yuri Victorovich
2022-06-08biology/{,py-}libsedml: Update 2.0.31 -> 2.0.32Yuri Victorovich
2022-06-07*/*: Bump port revisons after lang/go{117,118} updateDmitri Goutnik
2022-06-06biology/py-resdk: Update 14.1.0 -> 15.0.0Yuri Victorovich
2022-06-06biology/py-gffutils: Update 0.10.1 -> 0.11.0Yuri Victorovich
2022-06-06*/*: Repair after switching to versioned Go portsDmitri Goutnik
2022-06-03biology/py-scikit-bio: Broken on aarch64Yuri Victorovich
2022-05-30biology/py-pysam: Update 0.19.0 -> 0.19.1Yuri Victorovich
2022-05-26biology/hyphy: Update to 2.5.39Joseph Mingrone
2022-05-24biology/gatk: Use Java 17 instead of EOLed Java 12Yuri Victorovich
2022-05-24cleanup: remove expired versions of OpenJDK (12 through 16)Rene Ladan
2022-05-22biology/gatk: Update 4.2.6.0 -> 4.2.6.1Yuri Victorovich
2022-05-22devel/boost-all: bump all library consumers after boost upgradeDima Panov
2022-05-22biology/cufflinks: mark as BROKEN after recent boost upgradeDima Panov
2022-05-20biology/py-PySCeS: Update 1.0.1 -> 1.0.2Yuri Victorovich
2022-05-20biology/taxonkit: Update 0.11.0 -> 0.11.1Yuri Victorovich
2022-05-19biology/mothur: Update 1.47.0 -> 1.48.0Yuri Victorovich
2022-05-16biology/biosig: Update 2.4.0 -> 2.4.1Yuri Victorovich
2022-05-16biology/taxonkit: Update 0.10.1 -> 0.11.0Yuri Victorovich
2022-05-16devel/cmake: Update to 3.23.0Loïc Bartoletti
2022-05-13devel/grpc: Update to 1.46.0Po-Chuan Hsieh
2022-05-09devel/libffi: Bump deps PORTREVISION for shlib changeKevin Bowling
2022-05-08biology/py-dna-features-viewer: Update to 3.1.1Jason W. Bacon
2022-05-01biology/checkm: Update 1.1.11 -> 1.2.0Yuri Victorovich
2022-05-01biology/py-mrcfile: New port: MRC file I/O library which is used in structura...Yuri Victorovich
2022-04-27biology/py-pysam: Update 0.18.0 -> 0.19.0Yuri Victorovich
2022-04-27biology/py-resdk: Update 14.0.0 -> 14.1.0Yuri Victorovich
2022-04-27biology/pooler: use openmp only when omp.h is presentPiotr Kubaj
2022-04-27biology/ncbi-blast+: check for omp.h on all architecturesPiotr Kubaj
2022-04-27biology/cd-hit: check for omp.h on all architecturesPiotr Kubaj
2022-04-27biology/hhsuite: check for omp.h on all architecturesPiotr Kubaj
2022-04-27biology/fasttree: check for omp.h on all architecturesPiotr Kubaj
2022-04-26biology/unikmer: Update 0.18.8 -> 0.19.0Yuri Victorovich
2022-04-25biology/checkm: Update 1.1.10 -> 1.1.11Yuri Victorovich
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