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AgeCommit message (Expand)Author
2020-03-30Update WWWMateusz Piotrowski
2020-03-28biology/hyphy: Update to version 2.5.8Joseph Mingrone
2020-03-23Load appropriate Linuxulator bits automatically when starting serviceMateusz Piotrowski
2020-03-22Improve pkg-messageMateusz Piotrowski
2020-03-22biology/seaview: Update version 5.0=>5.0.2Muhammad Moinur Rahman
2020-03-21Resurrect biology/linux-foldingathomeMateusz Piotrowski
2020-03-21biology/diamond: Update to version 0.9.31.2Joseph Mingrone
2020-03-20biology/canu: Upgrade to 2.0Jason W. Bacon
2020-03-20biology/hyphy: Update to version 2.5.7Joseph Mingrone
2020-03-19Deprecate java/openjfx8-devel consumersTobias Kortkamp
2020-03-17biology/hyphy: Update to version 2.5.6Joseph Mingrone
2020-03-10Mark BROKEN: fails to buildAntoine Brodin
2020-03-08Drop dependency on devel/openmpJan Beich
2020-03-08Deprecate some ports using deprecated version of pythonAntoine Brodin
2020-03-07biology/ngs-sdk: Update 2.10.2 -> 2.10.4Yuri Victorovich
2020-03-07biology/jellyfish: Patch for clang 10Jason W. Bacon
2020-03-05Return theraven's ports to the pool after safekeeping his commit bit.Rene Ladan
2020-03-04biology/gatk: Update 4.1.4.1 -> 4.1.5.0Yuri Victorovich
2020-03-02biology/hyphy: Update to version 2.5.5Joseph Mingrone
2020-03-01biology/bowtie2: Upgrade to 2.4.1Jason W. Bacon
2020-02-29biology/mrbayes: Update to version 3.2.7Joseph Mingrone
2020-02-23Deprecate a few portsAntoine Brodin
2020-02-23biology/stringtie: fix build on GCC architecturesPiotr Kubaj
2020-02-21biology/hyphy: Update to version 2.5.4Joseph Mingrone
2020-02-19biology/vsearch: Upgrade to 2.14.2Jason W. Bacon
2020-02-16biology/stringtie: Update 1.3.4d -> 2.1.1Yuri Victorovich
2020-02-15biology/kallisto: Upgrade to 0.46.2Jason W. Bacon
2020-02-15biology/py-bx-python: Update 0.8.6 -> 0.8.8Yuri Victorovich
2020-02-09biology/py-macs2: Bump revision for previous run dep additionJason W. Bacon
2020-02-09biology/py-macs2: Add missing numpy run dependJason W. Bacon
2020-02-09biology/gatk: Change from gradle5 to gradle6Yuri Victorovich
2020-02-08Clean up MakefileSunpoet Po-Chuan Hsieh
2020-02-05biology/seaview: Update version 4.7=>5.0Muhammad Moinur Rahman
2020-02-03biology/diamond: Update to version 0.9.30Joseph Mingrone
2020-01-30Fix math/openblas and bump dependent portsSteve Wills
2020-01-29biology/hmmer: update to 3.3Fernando Apesteguía
2020-01-27biology/infernal: update to 1.1.3Fernando Apesteguía
2020-01-27Remove expired ports:Rene Ladan
2020-01-23biology/py-pysam: Update 0.15.3 -> 0.15.4Yuri Victorovich
2020-01-21math/openblas: Update to 0.3.7Steve Wills
2020-01-20biology/gatk: Update 4.1.3.0 -> 4.1.4.1Yuri Victorovich
2020-01-19- Update WWWDmitry Marakasov
2020-01-18biology/abyss: Broken on i386Yuri Victorovich
2020-01-17biology/muscle: unbreak in -CURRENTFernando Apesteguía
2020-01-17biology/ngs-sdk: Update 2.10.1 -> 2.10.2Yuri Victorovich
2020-01-14biology/gemma: Unbreak buildJason W. Bacon
2020-01-13devel/jsoncpp: Update 1.8.1 -> 1.9.2Yuri Victorovich
2020-01-13biology/muscle: update to 3.8.1551Fernando Apesteguía
2020-01-13biology/tRNAscan-SE: update to 2.0.5Fernando Apesteguía
2020-01-13biology/abyss: Update 2.1.5 -> 2.2.3Yuri Victorovich
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