summaryrefslogtreecommitdiff
path: root/biology
AgeCommit message (Expand)Author
2014-11-04biology/seqtools: 4.29 -> 4.30Kurt Jaeger
2014-11-02- Update to version 3.696Pawel Pekala
2014-10-20Cleanup plistBaptiste Daroussin
2014-10-19- Convert ports from benchmarks/ and biology/ to new USES=pythonMarcus von Appen
2014-10-16- Fix various distinfo errorsAlex Kozlov
2014-10-15biology/seqtools: 4.28 -> 4.29Kurt Jaeger
2014-10-13Update to version 1.14.2.Alexey Dokuchaev
2014-10-12- Update to 0.10Wen Heping
2014-10-08Fix pkg-plistRene Ladan
2014-10-08biology/boinc-simap: clean up pkg-plistRene Ladan
2014-10-06Add new port biology/ncbi-blastJohn Marino
2014-10-04- Update to 2.6.0Sunpoet Po-Chuan Hsieh
2014-09-21- any version for RUN_DEPENDSDirk Meyer
2014-09-21- update RUN_DEPENDS for rubygems-dbiDirk Meyer
2014-09-19biology/boinc-simap: Deprecate, project shutting down on 2015-01-01Rene Ladan
2014-09-13devel/glib12 x11-toolkits/gtk12:Tijl Coosemans
2014-09-10Update the default version of GCC in the Ports Collection from GCC 4.7.4Gerald Pfeifer
2014-09-05Fix MASTER_SITESAntoine Brodin
2014-09-02Second run at cleaning out non staged ports without pending PRBaptiste Daroussin
2014-09-01Remove non staged ports without pending PR from b*Baptiste Daroussin
2014-09-01- Update Unipro UGENE and documentation to version 1.14.0Alexey Dokuchaev
2014-08-26biology/crux: stage, modernize, add license (BSD[23]CLAUSE), cleanupsRene Ladan
2014-08-25- StagifyDmitry Marakasov
2014-08-23update ports:Kurt Jaeger
2014-08-22Fix build. Hopefully it doesn't break the app.Adam Weinberger
2014-08-15Fix build on -current by un-clobbering LDFLAGS. Also, don'tAdam Weinberger
2014-08-10- Update to 5.10.2Wen Heping
2014-08-09Convert the Python framework bits to USES=python.Marcus von Appen
2014-08-06- Switch to USES=libtool, drop .la filesDmitry Marakasov
2014-08-04USES=execinfoBaptiste Daroussin
2014-08-04biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagifyKurt Jaeger
2014-08-04biology/p5-bioperl: fix pkg-descr sidenote linkKurt Jaeger
2014-08-03Add a DOCS option.Adam Weinberger
2014-07-31biology/seqtools: 4.27 -> 4.28Kurt Jaeger
2014-07-29Convert a bunch of EXTRACT_SUFX=... into USES=tar:...Adam Weinberger
2014-07-29Convert a bunch of USE_BZIP2 to USES=tar:bzip2Adam Weinberger
2014-07-28Rename biology/ patch-xy patches to reflect the files they modify.Adam Weinberger
2014-07-27- Update to 1.6.924 [1]Wen Heping
2014-07-25Really fix.Mathieu Arnold
2014-07-25Fix build.Mathieu Arnold
2014-07-24biology/p5-Bio-Graphics: 2.37 -> 2.38Kurt Jaeger
2014-07-23Reset maintainership for ports not staged with no pending PRBaptiste Daroussin
2014-07-22- Switch to USES=libtool, drop .la filesDmitry Marakasov
2014-07-19biology/mummer: Use OPSYS with OSVERSIONJohn Marino
2014-07-17biology/garlic: Stage properly to unbreakJohn Marino
2014-07-15Add OPTIONS_DEFINE=DOCS for ports with %%PORTDOCS%% in the plist.Adam Weinberger
2014-07-15Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.Adam Weinberger
2014-07-13biology/platon: Unbreak by hosting known distfiles elsewhereJohn Marino
2014-07-12biology/seqtools: 4.26 -> 4.27Kurt Jaeger
2014-07-10Use gcc on all platforms.Adam Weinberger