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AgeCommit message (Expand)Author
2020-11-23biology/tabixpp: fix build on GCC architecturesPiotr Kubaj
2020-11-20Add education virtual categoryAdam Weinberger
2020-11-19biology/hyphy: Update to version 2.5.23Joseph Mingrone
2020-11-18biology/hyphy: Update to version 2.5.22Joseph Mingrone
2020-11-16biology/ncbi-blast+: Upgrade to 2.11.0Jason W. Bacon
2020-11-15biology/py-pysam: Update 0.16.0 -> 0.16.0.1Yuri Victorovich
2020-11-15biology/pooler: Optimise DNA sequencing primer-set combinationsJason W. Bacon
2020-11-11biology/viennarna: Update 2.4.15 -> 2.4.16Yuri Victorovich
2020-11-11biology/py-xenaPython: Update 1.0.10 -> 1.0.14Yuri Victorovich
2020-11-09biology/vt: Fix build with htslib 1.11Jason W. Bacon
2020-11-08biology/gcta: Switch eigen3 dep to USES frameworkJason W. Bacon
2020-11-07biology/bowtie2: Upgrade to 2.4.2Jason W. Bacon
2020-11-05biology/bcftools: Upgrade to 1.11Jason W. Bacon
2020-11-05biology/samtools: Upgrade to 1.11Jason W. Bacon
2020-11-05biology/htslib: Upgrade to 1.11.0Jason W. Bacon
2020-10-30biology/hyphy: Update to version 2.5.21Joseph Mingrone
2020-10-25biology/mummer: fix build on powerpc64 elfv2 and powerpc64lePiotr Kubaj
2020-10-19biology/mothur: fix build on powerpc64lePiotr Kubaj
2020-10-16biology/hyphy: Update to version 2.5.20Joseph Mingrone
2020-10-16biology/py-biopython: Upgrade to 1.78Jason W. Bacon
2020-10-13biology/hyphy: Update to version 2.5.19Joseph Mingrone
2020-10-09biology/gmap: enable on powerpc64lePiotr Kubaj
2020-10-05Update PyQt to 5.15.0, py-sip to 4.19.24 and qscintilla2 to 2.11.5Loïc Bartoletti
2020-09-29Convert REINPLACE_CMD to patch fileSunpoet Po-Chuan Hsieh
2020-09-27Update PYTHON option to use Python 3Sunpoet Po-Chuan Hsieh
2020-09-27Allow building on powerpc64le.Mark Linimon
2020-09-27Canonicalize powerpc64le CXXFLAGS to be the same as powerpc64.Mark Linimon
2020-09-27biology/abyss: Update 2.2.4 -> 2.2.5Yuri Victorovich
2020-09-27biology/ncbi-cxx-toolkit: Fix build on 13Yuri Victorovich
2020-09-26biology/py-biom-format: Fix fetch and relax scipy requirementJoseph Mingrone
2020-09-25biology/ncbi-cxx-toolkit: Update 21.0.0 -> 22.0.0Yuri Victorovich
2020-09-25biology/py-biom-format: Update to version 2.1.8Joseph Mingrone
2020-09-24biology/py-scikit-bio: Fix build on the i386 architectureYuri Victorovich
2020-09-24Also enable on powerpc64le.Mark Linimon
2020-09-24Also enable on powerpc64le.Mark Linimon
2020-09-24biology/py-biom-format: Restore in preparation for an update to v2.1.8Joseph Mingrone
2020-09-22biology/gmap: Upgrade to 2020.09.12Jason W. Bacon
2020-09-21Fix build with -fno-commonStefan Eßer
2020-09-19Unbreak bulk -aAntoine Brodin
2020-09-19Remove expired ports:Rene Ladan
2020-09-18biology/subread: Add -fcommon for clang 11Jason W. Bacon
2020-09-14biology/canu: Upgrade to 2.1Jason W. Bacon
2020-09-13biology/py-pyfaidx: Update 0.5.5.2 -> 0.5.9.1Yuri Victorovich
2020-09-08biology/gatk: Fix buildYuri Victorovich
2020-09-07biology/viennarna: Update 2.4.14 -> 2.4.15Yuri Victorovich
2020-09-06biology/gatk: Update 4.1.8.0 -> 4.1.8.1Yuri Victorovich
2020-09-04biology/mapm3: Reformat patches.Fernando Apesteguía
2020-09-04biology/mapm3: Fix build with llvm11, gcc10Fernando Apesteguía
2020-09-02biology/hyphy: Update to version 2.5.18 and add AVX optionJoseph Mingrone
2020-09-02biology/py-ete3: Update 3.1.1 -> 3.1.2Yuri Victorovich
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