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| author | Yuri Victorovich <yuri@FreeBSD.org> | 2023-12-17 10:01:42 -0800 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2023-12-17 11:01:48 -0800 |
| commit | f47c4702d35c68b06f643f35c9cb97aa064e4bb5 (patch) | |
| tree | 76ff8a4039340dec36e0c446201eb36ab0d591a3 /science | |
| parent | 4da4a21c347360da0913b2bfc3ffec3474f0f20e (diff) | |
| download | freebsd-ports-f47c4702d35c68b06f643f35c9cb97aa064e4bb5.zip | |
science/py-trx-python: New port: Experiments with new file format for tractography
Diffstat (limited to 'science')
| -rw-r--r-- | science/Makefile | 1 | ||||
| -rw-r--r-- | science/py-trx-python/Makefile | 34 | ||||
| -rw-r--r-- | science/py-trx-python/distinfo | 3 | ||||
| -rw-r--r-- | science/py-trx-python/pkg-descr | 2 |
4 files changed, 40 insertions, 0 deletions
diff --git a/science/Makefile b/science/Makefile index 54349ac30d32..7652e118ab37 100644 --- a/science/Makefile +++ b/science/Makefile @@ -442,6 +442,7 @@ SUBDIR += py-thewalrus SUBDIR += py-tobler SUBDIR += py-trainstation + SUBDIR += py-trx-python SUBDIR += py-tweedledum SUBDIR += py-vedo SUBDIR += py-veusz diff --git a/science/py-trx-python/Makefile b/science/py-trx-python/Makefile new file mode 100644 index 000000000000..affec6e6d4b7 --- /dev/null +++ b/science/py-trx-python/Makefile @@ -0,0 +1,34 @@ +PORTNAME= trx-python # this project is planned to be merged into DIPY (science/py-dipy) +DISTVERSION= 0.2.9 +CATEGORIES= science python +MASTER_SITES= PYPI +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Experiments with new file format for tractography +WWW= https://tee-ar-ex.github.io/trx-python/ + +LICENSE= BSD3CLAUSE +LICENSE_FILE= ${WRKSRC}/LICENSE + +BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}deepdiff>0:devel/py-deepdiff@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}nibabel>0:science/py-nibabel@${PY_FLAVOR} \ + ${PYNUMPY} \ + ${PYTHON_PKGNAMEPREFIX}packaging>=19.0:devel/py-packaging@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}setuptools_scm>=3.4:devel/py-setuptools_scm@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}setuptools_scm_git_archive>0:devel/py-setuptools_scm_git_archive@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}wheel>0:devel/py-wheel@${PY_FLAVOR} +RUN_DEPENDS+= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} # mistaken dependency, see https://github.com/tee-ar-ex/trx-python/issues/73 +TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}flake8>=0:devel/py-flake8@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}psutil>0:sysutils/py-psutil@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}pytest-console-scripts>0:devel/py-pytest-console-scripts@${PY_FLAVOR} + +USES= python +USE_PYTHON= pep517 cython autoplist pytest # few tests fail due to missing files + +#USE_GITHUB= yes +#GH_ACCOUNT= tee-ar-ex + +TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR} + +.include <bsd.port.mk> diff --git a/science/py-trx-python/distinfo b/science/py-trx-python/distinfo new file mode 100644 index 000000000000..6ad4dbd64b8f --- /dev/null +++ b/science/py-trx-python/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1702835339 +SHA256 (trx-python-0.2.9.tar.gz) = 16b4104d7c991879c601f60e8d587decac50ce60388aae8d0c754a92136d1caf +SIZE (trx-python-0.2.9.tar.gz) = 86016 diff --git a/science/py-trx-python/pkg-descr b/science/py-trx-python/pkg-descr new file mode 100644 index 000000000000..ca7ed7ee4295 --- /dev/null +++ b/science/py-trx-python/pkg-descr @@ -0,0 +1,2 @@ +trx is a Python implementation of the trx file-format +for tractography data. |