diff options
| author | Yuri Victorovich <yuri@FreeBSD.org> | 2024-02-13 08:42:03 -0800 |
|---|---|---|
| committer | Yuri Victorovich <yuri@FreeBSD.org> | 2024-02-13 08:44:08 -0800 |
| commit | b0f5256f17a15e6b91d7cec952e80b4d567fc5d3 (patch) | |
| tree | 2d7dcef1f29cc0e26f856a90881cb9d7a92c600a | |
| parent | b3cbb02bd163af4d91af16073ecde70db9628e80 (diff) | |
| download | freebsd-ports-b0f5256f17a15e6b91d7cec952e80b4d567fc5d3.zip | |
science/rdkit: update 2023_09_3 → 2023_09_5
Reported by: portscout
| -rw-r--r-- | science/rdkit/Makefile | 8 | ||||
| -rw-r--r-- | science/rdkit/distinfo | 14 | ||||
| -rw-r--r-- | science/rdkit/pkg-plist | 6 |
3 files changed, 17 insertions, 11 deletions
diff --git a/science/rdkit/Makefile b/science/rdkit/Makefile index ffa181a74888..f64903afc7b5 100644 --- a/science/rdkit/Makefile +++ b/science/rdkit/Makefile @@ -1,7 +1,6 @@ PORTNAME= rdkit DISTVERSIONPREFIX= Release_ -DISTVERSION= 2023_09_3 -PORTREVISION= 1 +DISTVERSION= 2023_09_5 CATEGORIES= science MASTER_SITES= https://fonts.google.com/download?family=Comic%20Neue&dummy=/:font DISTFILES= Comic_Neue.zip:font @@ -15,8 +14,6 @@ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/license.txt BROKEN_i386= non-constant-expression cannot be narrowed from type 'unsigned int' to 'npy_intp', see https://github.com/rdkit/rdkit/issues/4934 -BROKEN_FreeBSD_14= fails to compile as clang crashes, see https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=272652 -BROKEN_FreeBSD_15= fails to compile as clang crashes, see https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=272652 BUILD_DEPENDS= catch>0:devel/catch \ flex:textproc/flex \ @@ -37,6 +34,9 @@ CMAKE_OFF= RDK_INSTALL_INTREE RDK_USE_FLEXBISON \ RDK_BUILD_CPP_TESTS CMAKE_ARGS= -DCATCH_DIR=${LOCALBASE}/include/catch2 +CFLAGS+= -D_GNU_SOURCE +CXXFLAGS+= -D_GNU_SOURCE + DATADIR= ${PREFIX}/share/RDKit DOCSDIR= ${PREFIX}/share/doc/RDKit diff --git a/science/rdkit/distinfo b/science/rdkit/distinfo index ea87061de483..64fcb3758191 100644 --- a/science/rdkit/distinfo +++ b/science/rdkit/distinfo @@ -1,7 +1,7 @@ -TIMESTAMP = 1701933126 -SHA256 (rdkit-2023.09.3/Comic_Neue.zip) = b90d32da89882e5eea971682a83efa0feac9e5d9db1e43070c9eea7a87f96ff5 -SIZE (rdkit-2023.09.3/Comic_Neue.zip) = 180686 -SHA256 (rdkit-2023.09.3/rdkit-rdkit-Release_2023_09_3_GH0.tar.gz) = 8e8bb732ca2dc9481940bbf5dfa1127f0f014f80b73a1faa3c56761acb899748 -SIZE (rdkit-2023.09.3/rdkit-rdkit-Release_2023_09_3_GH0.tar.gz) = 80177185 -SHA256 (rdkit-2023.09.3/rareylab-RingDecomposerLib-v1.1.3_rdkit_GH0.tar.gz) = 944b5816712a48bbf88aa25d4300ce11871ddf6e971218eac08f90ed2192f715 -SIZE (rdkit-2023.09.3/rareylab-RingDecomposerLib-v1.1.3_rdkit_GH0.tar.gz) = 137931 +TIMESTAMP = 1707816112 +SHA256 (rdkit-2023.09.5/Comic_Neue.zip) = ee69c0c8f7ae7777cea33d9df1437815b0c79b12bd5d9ec7ca2877983bb6b980 +SIZE (rdkit-2023.09.5/Comic_Neue.zip) = 180682 +SHA256 (rdkit-2023.09.5/rdkit-rdkit-Release_2023_09_5_GH0.tar.gz) = 0b1ddf2bf822879e0863caf8efb794154e0a424108f2c1333ac94381c01fd688 +SIZE (rdkit-2023.09.5/rdkit-rdkit-Release_2023_09_5_GH0.tar.gz) = 80229877 +SHA256 (rdkit-2023.09.5/rareylab-RingDecomposerLib-v1.1.3_rdkit_GH0.tar.gz) = 944b5816712a48bbf88aa25d4300ce11871ddf6e971218eac08f90ed2192f715 +SIZE (rdkit-2023.09.5/rareylab-RingDecomposerLib-v1.1.3_rdkit_GH0.tar.gz) = 137931 diff --git a/science/rdkit/pkg-plist b/science/rdkit/pkg-plist index 296cc3c4db44..d0d492982c90 100644 --- a/science/rdkit/pkg-plist +++ b/science/rdkit/pkg-plist @@ -1181,6 +1181,12 @@ lib/libRDKitga.so.1.%%SHLIB_VER%% %%PYTHON%%%%DATADIR%%/Scripts/PythonFormat.py %%PYTHON%%%%DATADIR%%/Scripts/README.md %%PYTHON%%%%DATADIR%%/Scripts/create_deb_packages.sh +%%PYTHON%%%%DATADIR%%/Scripts/gen_rdkit_stubs/__init__.py +%%PYTHON%%%%DATADIR%%/Scripts/gen_rdkit_stubs/__main__.py +%%PYTHON%%%%DATADIR%%/Scripts/gen_rdkit_stubs/worker.py +%%PYTHON%%%%DATADIR%%/Scripts/patch_rdkit_docstrings/__init__.py +%%PYTHON%%%%DATADIR%%/Scripts/patch_rdkit_docstrings/__main__.py +%%PYTHON%%%%DATADIR%%/Scripts/patch_rdkit_docstrings/clang_worker.py %%PYTHON%%%%DATADIR%%/Scripts/test.sh %%DATADIR%%/license.txt %%PGSQL%%share/postgresql/extension/rdkit--3.8--4.0.sql |