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# Created by: Jason Bacon <bacon4000@gmail.com>
# $FreeBSD$
PORTNAME= jellyfish
PORTVERSION= 2.2.6
DISTVERSIONPREFIX= v
CATEGORIES= biology
MAINTAINER= bacon4000@gmail.com
COMMENT= Fast, memory-efficient counting of k-mers in DNA
LICENSE= GPLv3+
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= yaggo:devel/yaggo
GNU_CONFIGURE= yes
USES= autoreconf compiler:c++11-lib gmake libtool pathfix pkgconfig
USE_LDCONFIG= yes
USE_GITHUB= yes
GH_ACCOUNT= gmarcais
GH_PROJECT= Jellyfish
INSTALL_TARGET= install-strip
PLIST_SUB= VER=${PORTVERSION}
BROKEN_aarch64= Fails to compile: error: variable res is uninitialized
.include <bsd.port.pre.mk>
# SSE code assumes amd64 features
.if ${ARCH} != "amd64"
CONFIGURE_ARGS+=--without-sse
.endif
.include <bsd.port.post.mk>
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