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2020-05-19biology/ugene: prepare for Qt5-5.15Tobias C. Berner
2020-05-17Mark as BROKEN on powerpc64:Mark Linimon
2020-05-16Bump PORTREVISION for security/nettle shlib changeSunpoet Po-Chuan Hsieh
2020-05-16New port: biology/py-hits: Utilities for processing high-throughput sequencin...Yuri Victorovich
2020-05-16biology/py-scikit-bio: Fix licenseYuri Victorovich
2020-05-16biology/py-scikit-bio: Remove bogus linesYuri Victorovich
2020-05-16New port: biology/py-scikit-bio: Data structures, algorithms, educational res...Yuri Victorovich
2020-05-16New port: biology/py-pandas-charm: Library for getting character matrices int...Yuri Victorovich
2020-05-16New port: biology/py-ete3: Framework for the analysis and visualization of treesYuri Victorovich
2020-05-15Add compiler:c++11-lang to USES to fix build on GCC-based systems:Mark Linimon
2020-05-15New port: biology/scrm: Coalescent simulator for biological sequencesYuri Victorovich
2020-05-11Update SphinxDanilo G. Baio
2020-05-11biology/hhsuite: fix build on powerpc64 elfv2Piotr Kubaj
2020-05-10- Resurrect and unbreak by updating to version 34.0Alexey Dokuchaev
2020-05-09Update devel/gmake to 4.3.Tijl Coosemans
2020-05-09Update to 7.6.13Mateusz Piotrowski
2020-05-06Bump 37 ports depending on math/openblas through USES=blaslapack:openblas bec...Yuri Victorovich
2020-05-06Bump 46 ports depending on math/openblas because the after the recent math/op...Yuri Victorovich
2020-05-06Preserve Gradle 6.2.2 for biology/gatkTobias Kortkamp
2020-05-05Remove expired ports:Rene Ladan
2020-05-05biology/ruby-bio: remove expired optional dependency on textproc/ruby-xmlparserRene Ladan
2020-05-04biology/plink: Whole genome association analysis toolsetJason W. Bacon
2020-05-04- update libgd to 2.3.0Dirk Meyer
2020-05-03biology/hyphy: Update to version 2.5.12Joseph Mingrone
2020-05-02biology/iqtree: Update to version 2.0.4Joseph Mingrone
2020-04-25biology/hyphy: Update to version 2.5.10Joseph Mingrone
2020-04-24biology/diamond: Update to version 0.9.32Joseph Mingrone
2020-04-21- Swap back from net/openmpi3 to net/openmpiDanilo Egea Gondolfo
2020-04-21- Swap back from net/openmpi3 to net/openmpiDanilo Egea Gondolfo
2020-04-19Update to 7.6.9Mateusz Piotrowski
2020-04-19- Update net/openmpi to 4.0.3 (openmpi 1 is deprecated)Danilo Egea Gondolfo
2020-04-18Update to 7.6.8Mateusz Piotrowski
2020-04-15- Move OpenMPI support to net/openmpi3. OpenMPI 1 and 2 were deprecated.Danilo Egea Gondolfo
2020-04-15biology/gcta: Genome-wide Complex Trait AnalysisJason W. Bacon
2020-04-14Correct typo in pkg-message.Michael Gmelin
2020-04-14Improve startup script, join "Team FreeBSD" by defaultMichael Gmelin
2020-04-14biology/py-macs2: Upgrade to 2.2.7.1Jason W. Bacon
2020-04-12- Move OpenMPI support to net/openmpi3. OpenMPI 1 is deprecated.Danilo Egea Gondolfo
2020-04-09biology/fastp: Upgrade to 0.20.1Jason W. Bacon
2020-04-09biology/star: Upgrade to 2.7.3aJason W. Bacon
2020-04-04Deprecate ports broken for more than 6 monthsAntoine Brodin
2020-04-04biology/ngs-sdk: Update 2.10.4 -> 2.10.5Yuri Victorovich
2020-04-02Cosmetic changeSunpoet Po-Chuan Hsieh
2020-04-02Cosmetic changeSunpoet Po-Chuan Hsieh
2020-04-01kallisto: Patch for build with GCCJason W. Bacon
2020-04-01Update devel/tbb to 2020.2 and bump dependent port's revisionsGanael LAPLANCHE
2020-03-31Update WWWSunpoet Po-Chuan Hsieh
2020-03-31biology/cufflinks: Update 2.2.1-83 -> 2.2.1-89Yuri Victorovich
2020-03-30Update WWWMateusz Piotrowski
2020-03-28biology/hyphy: Update to version 2.5.8Joseph Mingrone
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