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AgeCommit message (Expand)Author
2023-01-11*/*: rename CHEESESHOP to PYPI in MASTER_SITESDmitry Marakasov
2023-01-09biology/hyphy: Update to upstream tag 2.5.46hf1Joseph Mingrone
2023-01-05biology/vcflib: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/tabixpp: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/star: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/pbbam: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/jellyfish: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/freebayes: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/vt: Bump PORTREVISION for biology/htslib updateJason W. Bacon
2023-01-05biology/bio-mocha: Update to 1.16Jason W. Bacon
2023-01-05biology/bcftools: Update to 1.16Jason W. Bacon
2023-01-05biology/samtools: Update to 1.16.1Jason W. Bacon
2023-01-05biology/htslib: Update to 1.16Jason W. Bacon
2022-12-31biology/lamarc: Refactor after wxgtk28 removalMuhammad Moinur Rahman
2022-12-30biology/py-biosig: New port: Library for reading and writing different biosig...Yuri Victorovich
2022-12-30biology/biosig: Update 2.4.3 -> 2.5.0Yuri Victorovich
2022-12-26biology/taxonkit: Update 0.14.0 -> 0.14.1Yuri Victorovich
2022-12-26biology/unikmer: Update 0.19.0 -> 0.19.1Yuri Victorovich
2022-12-25biology/hyphy: Update to 2.5.43Joseph Mingrone
2022-12-22biology/py-pyrodigal: Update 2.0.2 -> 2.0.3Yuri Victorovich
2022-12-19biology/snpeff: Update to 5.1Jason W. Bacon
2022-12-19biology/pooler: update to 1.86Silas S. Brown
2022-12-13biology/biolibc-tools: Update to 0.1.4.1Jason W. Bacon
2022-12-12biology/biolibc-tools: Update to 0.1.4Jason W. Bacon
2022-12-12biology/rna-seq: Metaport for RNA-Seq analysisJason W. Bacon
2022-12-12biology/fasda: Fast and simple differential analysisJason W. Bacon
2022-12-11biology/fastq-trim: Update to 0.1.2Jason W. Bacon
2022-12-11biology/vcf-split: Update to 0.1.5-4Jason W. Bacon
2022-12-11biology/peak-classifier: Update to 0.1.4-5Jason W. Bacon
2022-12-11biology/biolibc: Update to 0.2.4Jason W. Bacon
2022-12-11all: Bump PORTREVISION after lang/go{118,119} updateDmitri Goutnik
2022-12-10biology/cytoscape: Broken on armv6, armv7Yuri Victorovich
2022-12-10biology/metaeuk: Fix build on systems withour OpenMP enabledYuri Victorovich
2022-12-08biology/libcombine: Update 0.2.19 -> 0.2.20Yuri Victorovich
2022-12-06biology/py-pyrodigal: New port: Python binding for Prodigal, an ORF finder fo...Yuri Victorovich
2022-12-06Revert: "all: deprecate ports depending on expired security/py-keyrings.alt"Rene Ladan
2022-12-05biology/py-biopython: Update to 1.80Wen Heping
2022-12-02biology/metaeuk: Broken on systems where OpenMP isn't enabledYuri Victorovich
2022-12-01biology/metaeuk: append missing bracketPiotr Kubaj
2022-12-01biology/metaeuk: fix build without libomp and disable -m{arch,cpu}=nativePiotr Kubaj
2022-11-29biology/taxonkit: Update 0.13.0 -> 0.14.0Yuri Victorovich
2022-11-27*/*: bump PORTREVISION after the upgrade of math/suitesparse*Thierry Thomas
2022-11-26biology/gatk: Update 4.2.6.1 -> 4.3.0.0Yuri Victorovich
2022-11-26biology/cytoscape: Fix buildYuri Victorovich
2022-11-26biology/metaeuk: New port: Gene discovery and annotation for large-scale euka...Yuri Victorovich
2022-11-25biology/augustus: New port: Genome annotation toolYuri Victorovich
2022-11-24biology/barrnap: Update descrYuri Victorovich
2022-11-24biology/barrnap: New port: BAsic Rapid Ribosomal RNA PredictorYuri Victorovich
2022-11-24biology/cytoscape: Unbreak by re-adding and using maven-3.6.3Yuri Victorovich
2022-11-24biology/megahit: Add cmake patch to respect ports build flagsJason W. Bacon
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