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AgeCommit message (Expand)Author
2024-02-18*/*: Replace format=bsdtar with format=ustar in tar archive operationsYuri Victorovich
2024-02-18*/*: bump PORTREVISION after OpenMPI upgradeThierry Thomas
2024-02-16biology/biostar-tools: Update to 1.10.1_3Jason W. Bacon
2024-02-13devel/boost: bump consumers after library updateDima Panov
2024-02-12biology/py-bx-python: update 0.10.0 → 0.11.0Yuri Victorovich
2024-02-11all: Bump PORTREVISION after lang/go* updateAshish SHUKLA
2024-02-06biology/py-cutadapt: Update to 4.6Jason W. Bacon
2024-02-06biology/py-dnaio: Update to 1.2.0Jason W. Bacon
2024-02-04biology/diamond: Update to 2.1.9Joseph Mingrone
2024-02-04biology/metaeuk: Broken on powerpc64leYuri Victorovich
2024-02-04biology/hhsuite: Fix build on some systems by adding missing C++ #include sta...Yuri Victorovich
2024-02-03biology/python-nexus: Update to 2.9.0 and fix build with python-3.11Wen Heping
2024-02-03biology/py-newick: Add new portWen Heping
2024-02-02biology/ngs-sdk: Not for powerpc, powerpc64leYuri Victorovich
2024-01-29biology/py-bx-python: update to 0.10.0Ruslan Makhmatkhanov
2024-01-28*/*: bump PORTREVISION after the upgrade to SuiteSparseThierry Thomas
2024-01-27biology/htslib: Moved man to share/manMuhammad Moinur Rahman
2024-01-23biology/biolibc: Impelled to share/manMuhammad Moinur Rahman
2024-01-23biology/vsearch: Update to 2.27.0Jason W. Bacon
2024-01-21biology/py-pyrodigal: update 3.2.1 → 3.2.2Yuri Victorovich
2024-01-21biology/py-htseq: Fix build with python-3.11Wen Heping
2024-01-20biology/ncbi-cxx-toolkit: Broken on armv7Yuri Victorovich
2024-01-19biology/py-mrcfile: update 1.4.3 → 1.5.0Yuri Victorovich
2024-01-18biology/bowtie2: Update to 2.5.3Jason W. Bacon
2024-01-18biology/recombine: Remove expired portRene Ladan
2024-01-18biology/seqio: Remove expired portMuhammad Moinur Rahman
2024-01-18biology/sim4: Remove expired portMuhammad Moinur Rahman
2024-01-16biology/metaeuk: fix build on powerpc64le by disabling openmp until libomp is...Piotr Kubaj
2024-01-13*/*: bump PORTREVISION after the upgrade of SuiteSparse to v7.5.0Thierry Thomas
2024-01-12biology/mashmap: Broken on armv7Yuri Victorovich
2024-01-12MANPREFIX: eliminate its usageBaptiste Daroussin
2024-01-11biology/metaeuk: Add to NOT_FOR_ARCHS, and correct BROKENxx linesYuri Victorovich
2024-01-11biology/metaeuk: Correct the reason in the BROKEN_xx lineYuri Victorovich
2024-01-11biology/metaeuk: Not for 32-bit architecturesYuri Victorovich
2024-01-11biology/metaeuk: Broken on i386, armv7, powerpc64Yuri Victorovich
2024-01-11biology/btllib: Temporarily not for non-64-bit architecturesYuri Victorovich
2024-01-10biology/atac-seq: Update to 0.2.0Jason W. Bacon
2024-01-10biology/py-macs3: Peak caller for TF binding sitesJason W. Bacon
2024-01-10MAN?PREFIX: eleminate its usage and move man to share/manBaptiste Daroussin
2024-01-09MAN[1-5]PREFIX: eleminate its usage and move man to share/manBaptiste Daroussin
2024-01-05biology/mashmap: update 3.1.2 → 3.1.3Yuri Victorovich
2024-01-05biology/ncbi-cxx-toolkit: update 27.0.0 → 28.0.0Yuri Victorovich
2024-01-01*/*: chase the upgrade of BLAS / LAPACK to 3.12.0Thierry Thomas
2024-01-01lang/zig: update to 0.11.0Nathan Fisher
2023-12-31*/*: chase the upgrade of SuiteSparseThierry Thomas
2023-12-31*/*: Sunset 12.4-RELEASE/12-STABLE from ports treeMuhammad Moinur Rahman
2023-12-30biology/ucsc-userapps: Replace dependenciesMuhammad Moinur Rahman
2023-12-29biology/diamond: Fix build on main after import of clang 17Dimitry Andric
2023-12-29*/*: Refactor with IGNORE_WITH_MYSQLMuhammad Moinur Rahman
2023-12-28biology/libbigwig: Fix name-clashing in roundupJason E. Hale
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