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2001-09-13style fix: un"echo" commandsMario Sergio Fujikawa Ferreira
Approved by: MAINTAINER
2001-09-13Update to 3.9Mario Sergio Fujikawa Ferreira
PR: 30398 Submitted by: MAINTAINER
2001-09-11Bump png majorAndrey A. Chernov
2001-09-06Fix a buglet with the use of XFREE86_VERSION without includingAnton Berezin
bsd.port.pre.mk first. Spotted by: Dan Langille <dan@langille.org>
2001-09-06Make biology/rasmol work at all color depths.Anton Berezin
PR: 30406 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
2001-09-06- Update to version 1.00.a3Johann Visagie
- Use pkg-req to check the installed version of Python
2001-08-29- Update to version 3.1Johann Visagie
PR: 30176 Submitted by: David A. Bader <dbader@eece.unm.edu> (MAINTAINER)
2001-08-29- Update to version 1.0.3Johann Visagie
PR: 30175 Submitted by: David A. Bader <dbader@eece.unm.edu> (MAINTAINER)
2001-08-22- Update to version 1.2.4Johann Visagie
2001-08-22- Update port to version 2.2gJohann Visagie
2001-08-22Add seqio 1.2.2, a set of C functions which can read/writeJohann Visagie
biological sequence files. PR: 29922 Submitted by: Tony Maher <tonym@biolateral.com.au>
2001-08-22- Update to version 3.6.a2.1 - since the distribution tarball hadn't beenJohann Visagie
renamed between versions, this port failed checksum. - Apply some whitespace edits and cut pkg-descr down to size to placate portlint. Reported by: Jason Stajich <jason@chg.mc.duke.edu> Approved by: No response from MAINTAINER
2001-08-20- Move the (very) long list of manpages from the port Makefile to a separateJohann Visagie
file. Inspired by: nectar's treatment of security/heimdal
2001-08-20Update to 0.95.Trevor Johnson
Compile molecule_tools.cpp with -O0 on all architectures, not just the Alpha, to avoid g++ pessimization. Submitted by: Matthew Emmerton <matt@gsicomp.on.ca>
2001-08-20Remove a patch turd from the pkg-plistKris Kennaway
2001-08-17Add treeviewx 0.1.1, a phylogenetic tree viewer.Johann Visagie
PR: 29770 Submitted by: Tony Maher <tonym@biolateral.com.au>
2001-08-14Add p5-bioperl-devel 0.9.0,Johann Visagie
a collection of Perl modules for bioinformatics (developer's release).
2001-08-13Update to version 1.75Johann Visagie
2001-08-13- Properly list run-time dependencies in RUN_DEPENDS in Makefile.Johann Visagie
- Deploy %%PERL_VER%% and %%PERL_ARCH%% pragmas consistently throughout pkg-plist. (Ouch, that was embarrassing.) - Bump PORTREVISION due to the above. - Update my email address and the project's URL in pkg-descr.
2001-08-09upgrade to 0.26Ying-Chieh Liao
drop maintainership
2001-08-07Add lamarc 2001.08.06,Johann Visagie
a package of programs for computing population parameters.
2001-08-06Add recombine 1.40, a program to fit population models across sites.Johann Visagie
2001-08-06Add fluctuate 1.30, a program to fit population models.Johann Visagie
2001-08-06Add coalesce 1.50, a program to fit population models.Johann Visagie
2001-08-06Correct my email address.Johann Visagie
2001-08-06Add migrate 1.2,Johann Visagie
a program to estimate population sizes and migration rates.
2001-08-06Update maintainer's email address.Johann Visagie
Approved by: MAINTAINER
2001-08-03- Update port to version 2.0.1Johann Visagie
- Add two new EMBASSY applications, MEME and HMMER.
2001-07-30add USE_XLIBMario Sergio Fujikawa Ferreira
PR: 29330 Submitted by: bento, Patrick Li <pat@databits.net>
2001-07-25This port require bison to build so add USE_BISON.Steve Price
2001-07-11Remove obsolete pointer to online documentation.Johann Visagie
2001-07-11Update package's URL; my email address.Johann Visagie
2001-07-10Update Tony Maher's email address.Bill Fenner
2001-07-10${PREFIX}/share/${PORTNAME} --> ${DATADIR}Maxim Sobolev
2001-07-09Update to version 1.00.a2Johann Visagie
2001-07-08Add NOPORTDOCS support to pkg-plistYing-Chieh Liao
2001-07-06Update to version 1.3.0Johann Visagie
PR: 28761 Submitted by: Patrick Li <pat@databits.net>
2001-07-05- General clean-up of port.Johann Visagie
- Install PDF and HTML documentation. - Take over maintainership. Approved by: Silence from previous maintainer; no objections from -ports
2001-07-04- Update to version 0.7.1Johann Visagie
- Add a build-time message to inform the user of available options.
2001-07-04- Add %%PORTDOCS%% support to pkg-plist.Johann Visagie
- $INSTALL_MAN -> $INSTALL_DATA in Makefile where appropriate. PR: 28668 Submitted by: Patrick Li <pat@databits.net>
2001-07-04Add grappa 1.0.2, Genome Rearrangements Analysis and PhylogenyJohann Visagie
Software. PR: 28541 Submitted by: dbader@eece.unm.edu
2001-07-04Add %%PORTDOCS%% support to pkg-plist, and tweak Makefile slightly to supportJohann Visagie
it. PR: 28665 Submitted by: Patrick Li <pat@databits.net>
2001-07-03Add %%PORTDOCS%% suppor to pkg-plist.Johann Visagie
Change $PREFIX to $MAN1PREFIX as appropriate in Makefile. PR: 28664 Submitted by: Patrick Li <pat@databits.net>
2001-07-03Add support for %%PORTDOCS%%.Johann Visagie
PR: 28670 Submitted by: Patrick Li <pat@databits.net>
2001-07-03Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.Johann Visagie
PR: 28666 Submitted by: Patrick Li <pat@databits.net>
2001-07-03Update to version 3.04Johann Visagie
PR: 28614 Submitted by: David A. Bader <dbader@eece.unm.edu> (MAINTAINER)
2001-07-03Update to version 1.82Johann Visagie
PR: 28609 Submitted by: David A. Bader <dbader@eece.unm.edu> (MAINTAINER)
2001-06-29Use $FILESDIR rather than hard-coded path.Johann Visagie
2001-06-27Updating my email address in my remaining ports.Johann Visagie
Prompted by: vanilla
2001-06-26Embarrassingly long overdue update to 0.7.0, including optional support forJohann Visagie
GUI (Tk) and CORBA extensions.
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