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AgeCommit message (Expand)Author
2018-10-07biology/ncbi-toolkit: Update 2012.06.20 -> 2017.01.06Yuri Victorovich
2018-10-07biology/tinker: Update 7.1.3 -> 8.4.4; Move to science/Yuri Victorovich
2018-10-06biology/py-biom-format: Update to version 2.1.7Joseph Mingrone
2018-10-06Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, exceptDag-Erling Smørgrav
2018-10-04Update devel/tbb to version 2019 and bump dependent port's revisionsGanael LAPLANCHE
2018-09-28- Update to 1-14-10Danilo Egea Gondolfo
2018-09-28- Unbreak by adding missing pkg-plistWen Heping
2018-09-27Allow building on powerpc64.Mark Linimon
2018-09-26Update Objective-C LLVM version to 6.0.Brooks Davis
2018-09-22Change 4 ports from net/mpich2 to net/mpichYuri Victorovich
2018-09-22- Update to 1.63Wen Heping
2018-09-22Fix build on gcc-based archs by updating USES.Mark Linimon
2018-09-21Update to 1.5.2Sunpoet Po-Chuan Hsieh
2018-09-21New port: biology/py-loompy: Work with .loom files for single-cell RNA-seq dataYuri Victorovich
2018-09-20biology/py-cutadapt: Upgrade to 1.18Jason W. Bacon
2018-09-19biology/ngs-sdk: Update 2.9.1 -> 2.9.2Yuri Victorovich
2018-09-18Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-basedMark Linimon
2018-09-18More precisely specify USES=compiler to fix build on gcc-basedMark Linimon
2018-09-17biology/py-pysam: Update 0.15.0 -> 0.15.1Yuri Victorovich
2018-09-10Add DOCS options to ports that should have one.Mathieu Arnold
2018-09-08biology/seaview: Fix build with Clang 6Tobias Kortkamp
2018-09-05Update science/hdf5 to 1.10.2Sunpoet Po-Chuan Hsieh
2018-09-02Update to 1.31.0Jason E. Hale
2018-09-01biology/stacks: Enable OpenMP (oversight in previous commit)Jason W. Bacon
2018-08-27biology/iqtree: Update to version 1.6.7Joseph Mingrone
2018-08-26biology/py-bx-python: Update 0.8.1 -> 0.8.2Yuri Victorovich
2018-08-25biology/unanimity: Upgrade to latest release, soften dep version requirementsJason W. Bacon
2018-08-25biology/protomol: Fix doubled USES overwriting the old valueTobias Kortkamp
2018-08-25biology/protomol: Fix build with Clang 6Tobias Kortkamp
2018-08-25biology/primer3: Fix build with Clang 6Tobias Kortkamp
2018-08-25biology/libsbml: Fix build with Clang 6Tobias Kortkamp
2018-08-25biology/avida: Fix build with Clang 6Tobias Kortkamp
2018-08-25biology/lamarc: Fix build with Clang 6Tobias Kortkamp
2018-08-24Mark as broken with clang6 after r473289.Mark Linimon
2018-08-24- Update to 1.72Wen Heping
2018-08-16Remove expired ports:Rene Ladan
2018-08-12biology/cytoscape: Fix licenseYuri Victorovich
2018-08-12Mark as broken on arm.Mark Linimon
2018-08-09devel/boost-*: update to 1.68.0Jan Beich
2018-08-09biology/py-orange3-bioinformatics: Update 3.1.1 -> 3.2.0Yuri Victorovich
2018-08-08biology/py-orange3-single-cell: Update 0.7.0 -> 0.8.0Yuri Victorovich
2018-08-08Regular sorting of categories Makefiles.Mathieu Arnold
2018-08-07New port: biology/py-orange3-single-cell: Orange add-on for gene expression o...Yuri Victorovich
2018-08-04biology/vcftools: Update to 0.1.16, a security releaseJason W. Bacon
2018-08-02biology/bcftools: update to 1.9Fernando Apesteguía
2018-08-02biology/samtools: update to 1.9Fernando Apesteguía
2018-08-02biology/htslib: update to 1.9Fernando Apesteguía
2018-07-30biology/py-pysam: Update 0.14.1 -> 0.15.0Yuri Victorovich
2018-07-29Bump PORTREVISION for ports depending on the canonical version of GCCGerald Pfeifer
2018-07-27biology/linux-foldingathome: reset maintainer by requestEitan Adler
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