diff options
Diffstat (limited to 'science')
461 files changed, 461 insertions, 1 deletions
diff --git a/science/2d-rewriter/Makefile b/science/2d-rewriter/Makefile index 56025067e62c..ae8a883fd9c7 100644 --- a/science/2d-rewriter/Makefile +++ b/science/2d-rewriter/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= ports@FreeBSD.org COMMENT= Cellular automata simulator +WWW= https://github.com/iserikov/2d-rewriter USES= imake xorg USE_XORG= x11 xext diff --git a/science/ALPSCore/Makefile b/science/ALPSCore/Makefile index a04206d82b80..df74fa0c6b57 100644 --- a/science/ALPSCore/Makefile +++ b/science/ALPSCore/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= ports@FreeBSD.org COMMENT= Generic algorithms and utilities for condensed matter physics +WWW= https://github.com/ALPSCore/ALPSCore LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE.TXT diff --git a/science/ChipmunkPhysics/Makefile b/science/ChipmunkPhysics/Makefile index f00d64f4ce5a..3e155db9af80 100644 --- a/science/ChipmunkPhysics/Makefile +++ b/science/ChipmunkPhysics/Makefile @@ -9,6 +9,7 @@ DISTNAME= Chipmunk-${PORTVERSION} MAINTAINER= ports@stdrand.com COMMENT= 2D physics engine written in C +WWW= https://chipmunk-physics.net/ LICENSE= MIT diff --git a/science/InsightToolkit/Makefile b/science/InsightToolkit/Makefile index 0b6ac31d9ea1..c0dfb9f8d6e2 100644 --- a/science/InsightToolkit/Makefile +++ b/science/InsightToolkit/Makefile @@ -8,6 +8,7 @@ DISTFILES= InsightData-5.0.1.tar.gz:data MAINTAINER= ports@FreeBSD.org COMMENT= Insight Toolkit +WWW= https://www.itk.org LICENSE= APACHE20 diff --git a/science/PETSc/Makefile b/science/PETSc/Makefile index 3969ca900932..42116306ded8 100644 --- a/science/PETSc/Makefile +++ b/science/PETSc/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME:tl}-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Suite of data structures and routines from Argonne National Laboratory +WWW= https://www.mcs.anl.gov/petsc LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/R-cran-AMORE/Makefile b/science/R-cran-AMORE/Makefile index 10793a0af811..c724bb2dea1d 100644 --- a/science/R-cran-AMORE/Makefile +++ b/science/R-cran-AMORE/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION:C/\./-/g:C/-/./1} MAINTAINER= wen@FreeBSD.org COMMENT= MORE flexible neural network package +WWW= http://rwiki.sciviews.org/doku.php?id=packages:cran:amore LICENSE= GPLv2 GPLv3 LICENSE_COMB= dual diff --git a/science/R-cran-DCluster/Makefile b/science/R-cran-DCluster/Makefile index ee3d17fcd92a..f4692449cd30 100644 --- a/science/R-cran-DCluster/Makefile +++ b/science/R-cran-DCluster/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Functions for the detection of spatial clusters of diseases +WWW= https://cran.r-project.org/web/packages/DCluster/ LICENSE= GPLv2+ diff --git a/science/R-cran-Epi/Makefile b/science/R-cran-Epi/Makefile index c53e53af1db6..17bfa0c63ef4 100644 --- a/science/R-cran-Epi/Makefile +++ b/science/R-cran-Epi/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Package for statistical analysis in epidemiology +WWW= https://cran.r-project.org/web/packages/Epi/ LICENSE= GPLv2 diff --git a/science/R-cran-FAdist/Makefile b/science/R-cran-FAdist/Makefile index 05b3f7db46e1..e7406c59c529 100644 --- a/science/R-cran-FAdist/Makefile +++ b/science/R-cran-FAdist/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION} MAINTAINER= thierry@FreeBSD.org COMMENT= Probability distributions that are sometimes useful in hydrology +WWW= https://cran.r-project.org/web/packages/FAdist/index.html LICENSE= GPLv2 diff --git a/science/R-cran-bayesm/Makefile b/science/R-cran-bayesm/Makefile index c7dee09738dd..82538961218c 100644 --- a/science/R-cran-bayesm/Makefile +++ b/science/R-cran-bayesm/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= wen@FreeBSD.org COMMENT= Bayesian Inference for Marketing/Micro-econometrics +WWW= https://www.perossi.org/home/bsm-1 LICENSE= GPLv2 GPLv3 LICENSE_COMB= dual diff --git a/science/R-cran-cmprsk/Makefile b/science/R-cran-cmprsk/Makefile index 252d7dd13e79..16d79ca315ae 100644 --- a/science/R-cran-cmprsk/Makefile +++ b/science/R-cran-cmprsk/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Subdistribution Analysis of Competing Risks +WWW= https://cran.r-project.org/web/packages/cmprsk/ LICENSE= GPLv2+ diff --git a/science/R-cran-e1071/Makefile b/science/R-cran-e1071/Makefile index 4c72c1f72b0e..a531adce9257 100644 --- a/science/R-cran-e1071/Makefile +++ b/science/R-cran-e1071/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Misc Functions of the Department of Statistics (e1071), TU Wien +WWW= https://cran.r-project.org/web/packages/e1071/ LICENSE= GPLv2+ diff --git a/science/R-cran-eco/Makefile b/science/R-cran-eco/Makefile index c9e6f52d2b08..f5bc518e189e 100644 --- a/science/R-cran-eco/Makefile +++ b/science/R-cran-eco/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION:C/\./-/g:C/-/./1} MAINTAINER= wen@FreeBSD.org COMMENT= R Package for Ecological Inference in 2x2 Tables +WWW= https://imai.princeton.edu/software/eco.html USES= cran:auto-plist,compiles diff --git a/science/R-cran-epicalc/Makefile b/science/R-cran-epicalc/Makefile index b2cb3a862c28..255ab8bbffa5 100644 --- a/science/R-cran-epicalc/Makefile +++ b/science/R-cran-epicalc/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION} MAINTAINER= wen@FreeBSD.org COMMENT= Epidemiological calculator +WWW= https://cran.r-project.org/web/packages/epicalc/ USES= cran:auto-plist diff --git a/science/R-cran-etm/Makefile b/science/R-cran-etm/Makefile index 932d09568631..f1bdd4814e1d 100644 --- a/science/R-cran-etm/Makefile +++ b/science/R-cran-etm/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Empirical Transition Matrix +WWW= https://cran.r-project.org/web/packages/etm/ LICENSE= MIT diff --git a/science/R-cran-fastICA/Makefile b/science/R-cran-fastICA/Makefile index 3062f59d9bb5..2929a205a6dc 100644 --- a/science/R-cran-fastICA/Makefile +++ b/science/R-cran-fastICA/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= ygy@FreeBSD.org COMMENT= FastICA Algorithms to Perform ICA and Projection Pursuit +WWW= https://CRAN.R-project.org/package=fastICA LICENSE= GPLv2 GPLv3 LICENSE_COMB= dual diff --git a/science/R-cran-kernlab/Makefile b/science/R-cran-kernlab/Makefile index 19c25bc4d113..bf7b4364e5c6 100644 --- a/science/R-cran-kernlab/Makefile +++ b/science/R-cran-kernlab/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Kernel-Based Machine Learning Lab +WWW= https://cran.r-project.org/web/packages/kernlab/ LICENSE= GPLv2 diff --git a/science/R-cran-ks/Makefile b/science/R-cran-ks/Makefile index 88de1674754d..a3a92ef50e65 100644 --- a/science/R-cran-ks/Makefile +++ b/science/R-cran-ks/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${PORTVERSION} MAINTAINER= thierry@FreeBSD.org COMMENT= Kernel Smoothing +WWW= https://cran.r-project.org/package=ks LICENSE= GPLv2+ diff --git a/science/R-cran-snow/Makefile b/science/R-cran-snow/Makefile index 28c5a33c0e0b..c4c9ecf186f9 100644 --- a/science/R-cran-snow/Makefile +++ b/science/R-cran-snow/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Support for simple parallel computing in R +WWW= https://cran.r-project.org/web/packages/snow/ LICENSE= GPLv2+ diff --git a/science/R-cran-som/Makefile b/science/R-cran-som/Makefile index 3599001fc0ff..9142d51b4231 100644 --- a/science/R-cran-som/Makefile +++ b/science/R-cran-som/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Self-Organizing Map +WWW= https://cran.r-project.org/web/packages/som/ LICENSE= GPLv3 diff --git a/science/R-cran-udunits2/Makefile b/science/R-cran-udunits2/Makefile index b045acac0b21..d0011272ee8e 100644 --- a/science/R-cran-udunits2/Makefile +++ b/science/R-cran-udunits2/Makefile @@ -5,6 +5,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= tota@FreeBSD.org COMMENT= Udunits-2 Bindings for R +WWW= https://cran.r-project.org/web/packages/udunits2/ LICENSE= GPLv2 diff --git a/science/abinit/Makefile b/science/abinit/Makefile index 5a31bee0baae..ee08d0408c99 100644 --- a/science/abinit/Makefile +++ b/science/abinit/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Full-featured atomic-scale first-principles simulation software +WWW= https://www.abinit.org LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/afni/Makefile b/science/afni/Makefile index 7f1f791ca60e..c3a4d4ffbea4 100644 --- a/science/afni/Makefile +++ b/science/afni/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science biology graphics perl5 python MAINTAINER= fernape@FreeBSD.org COMMENT= Advanced Functional Neuro Imaging +WWW= https://afni.nimh.nih.gov/afni/ LICENSE= GPLv2 diff --git a/science/agrum/Makefile b/science/agrum/Makefile index ccffcb4c6bdd..8a8d6ecb976e 100644 --- a/science/agrum/Makefile +++ b/science/agrum/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science math MAINTAINER= yuri@FreeBSD.org COMMENT= Graphical modeler for Bayesian networks, influence diagrams, etc +WWW= https://agrum.gitlab.io/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/aircraft-datcom/Makefile b/science/aircraft-datcom/Makefile index 6975e22d88b6..5a1f0604c604 100644 --- a/science/aircraft-datcom/Makefile +++ b/science/aircraft-datcom/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= ports@FreeBSD.org COMMENT= Modified USAF Aircraft Stability and Control Data Compendium +WWW= https://github.com/arktools/aircraft-datcom LICENSE= GPLv3 diff --git a/science/antioch/Makefile b/science/antioch/Makefile index 12c773b5b0ad..4f6175a378a7 100644 --- a/science/antioch/Makefile +++ b/science/antioch/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= C++ Chemical Kinetics, Thermodynaimics, and Transport Library +WWW= https://libantioch.github.io/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/apbs/Makefile b/science/apbs/Makefile index 1ff8f3ba05bd..bad85c33bc33 100644 --- a/science/apbs/Makefile +++ b/science/apbs/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Electrostatic and solvation properties for complex molecules +WWW= https://www.poissonboltzmann.org/ LICENSE= MIT diff --git a/science/ascent/Makefile b/science/ascent/Makefile index a3617f44fec1..2ea5148981ae 100644 --- a/science/ascent/Makefile +++ b/science/ascent/Makefile @@ -7,6 +7,7 @@ PKGNAMESUFFIX= -visualizer MAINTAINER= yuri@FreeBSD.org COMMENT= Visualization and analysis runtime for multi-physics HPC simulations +WWW= https://ascent.readthedocs.io/en/latest/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/atompaw/Makefile b/science/atompaw/Makefile index ae64c6f9bd45..df0449a4972b 100644 --- a/science/atompaw/Makefile +++ b/science/atompaw/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= http://users.wfu.edu/natalie/papers/pwpaw/ MAINTAINER= yuri@FreeBSD.org COMMENT= Tool for projector augmented wave functions for molecular simulations +WWW= https://users.wfu.edu/natalie/papers/pwpaw/ LICENSE= BSD3CLAUSE diff --git a/science/avogadro2/Makefile b/science/avogadro2/Makefile index 7e2d41cc02f2..bedc48281854 100644 --- a/science/avogadro2/Makefile +++ b/science/avogadro2/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Chemical editor and visualization application +WWW= https://www.openchemistry.org/projects/avogadro2/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/avogadrolibs/Makefile b/science/avogadrolibs/Makefile index 9b1708fa7f2f..9ad02d76245c 100644 --- a/science/avogadrolibs/Makefile +++ b/science/avogadrolibs/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Avogadro2 libraries for chemical editor and visualization applications +WWW= https://www.openchemistry.org/projects/avogadro2/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/axom/Makefile b/science/axom/Makefile index 3c9e6f579836..239fdbe60804 100644 --- a/science/axom/Makefile +++ b/science/axom/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Infrastructure for development of multi-physics applications and tools +WWW= https://github.com/LLNL/axom LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/bagel/Makefile b/science/bagel/Makefile index f9f5ae99ff50..60c2e72f2605 100644 --- a/science/bagel/Makefile +++ b/science/bagel/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Brilliantly Advanced General Electronic-structure Library +WWW= https://nubakery.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/bddsolve/Makefile b/science/bddsolve/Makefile index 66eaa2392c6a..0012d7d5dff0 100644 --- a/science/bddsolve/Makefile +++ b/science/bddsolve/Makefile @@ -7,6 +7,7 @@ DISTNAME= ${PORTNAME}-source-${PORTVERSION} MAINTAINER= ed@FreeBSD.org COMMENT= BDD-based satisfiability and reachability solver +WWW= https://www.win.tue.nl/~wieger/bddsolve/ LIB_DEPENDS+= libbdd.so:science/buddy \ libboost_program_options.so:devel/boost-libs diff --git a/science/berkeleygw/Makefile b/science/berkeleygw/Makefile index c848a94d760e..2278bf1c60e8 100644 --- a/science/berkeleygw/Makefile +++ b/science/berkeleygw/Makefile @@ -6,6 +6,7 @@ DISTFILES= m1dgnhiemo47lhxczrn6si71bwxoxor8.gz MAINTAINER= yuri@FreeBSD.org COMMENT= Scientific program aimed at the ab initio virtual experimentation +WWW= https://berkeleygw.org LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/license.txt diff --git a/science/bodr/Makefile b/science/bodr/Makefile index 619679e86fd7..38714f0c597d 100644 --- a/science/bodr/Makefile +++ b/science/bodr/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= SF MAINTAINER= ports@FreeBSD.org COMMENT= Chemistry data like element and isotope properties, atomic radii, etc +WWW= https://sourceforge.net/projects/bodr/ LICENSE= CC0-1.0 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/buddy/Makefile b/science/buddy/Makefile index a51ac0b9f01d..73af1e4e8ab0 100644 --- a/science/buddy/Makefile +++ b/science/buddy/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/BuDDy%20${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Binary Decision Diagram library +WWW= http://buddy.sourceforge.net/ USES= gmake libtool GNU_CONFIGURE= yes diff --git a/science/cantera/Makefile b/science/cantera/Makefile index c2758db68045..3ccdb0ee24bd 100644 --- a/science/cantera/Makefile +++ b/science/cantera/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # chemistry physics MAINTAINER= yuri@FreeBSD.org COMMENT= Chemical kinetics, thermodynamics, and transport tool suite +WWW= https://cantera.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/License.txt diff --git a/science/cardioid/Makefile b/science/cardioid/Makefile index d60938ab7143..39d3c8c33fab 100644 --- a/science/cardioid/Makefile +++ b/science/cardioid/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Cardiac simulation toolkit +WWW= https://github.com/LLNL/cardioid LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/cdcl/Makefile b/science/cdcl/Makefile index 58ded39c15a0..bd34ea5efb7e 100644 --- a/science/cdcl/Makefile +++ b/science/cdcl/Makefile @@ -9,6 +9,7 @@ DISTNAME= dcl-${PORTVERSION}-C MAINTAINER= murashin@gfd-dennou.org COMMENT= Scientific graphic library for geoscience +WWW= https://www.gfd-dennou.org/arch/dcl/ # Converted from RESTRICTED LICENSE= cdcl diff --git a/science/cdf/Makefile b/science/cdf/Makefile index 04e928ebf836..f90fac4d0c05 100644 --- a/science/cdf/Makefile +++ b/science/cdf/Makefile @@ -7,6 +7,7 @@ DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} MAINTAINER= stephen@FreeBSD.org COMMENT= Device independent view of the CDF data model +WWW= https://cdf.gsfc.nasa.gov/ LICENSE= NASA-G LICENSE_NAME= NASA/Goddard Space Flight Center diff --git a/science/cdk/Makefile b/science/cdk/Makefile index ce871723ee72..d74af3a1c372 100644 --- a/science/cdk/Makefile +++ b/science/cdk/Makefile @@ -6,6 +6,7 @@ PKGNAMESUFFIX= -chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Chemistry Development Kit +WWW= https://cdk.github.io/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/cdo/Makefile b/science/cdo/Makefile index 52ab0c774cba..95fc6ff66f1e 100644 --- a/science/cdo/Makefile +++ b/science/cdo/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://code.mpimet.mpg.de/attachments/download/27276/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Climate Data Operators +WWW= https://code.mpimet.mpg.de/projects/cdo LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/cgnslib/Makefile b/science/cgnslib/Makefile index 00ae403f646e..ea20558fa2b7 100644 --- a/science/cgnslib/Makefile +++ b/science/cgnslib/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= thierry@FreeBSD.org COMMENT= CFD General Notation System library code +WWW= https://cgns.github.io/ LICENSE= AS-IS LICENSE_NAME= AS-IS diff --git a/science/cgribex/Makefile b/science/cgribex/Makefile index e1ea9fa03beb..7d4be0176d64 100644 --- a/science/cgribex/Makefile +++ b/science/cgribex/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= https://code.mpimet.mpg.de/attachments/download/21178/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Lightweight GRIBEX in C with portable Fortran interface +WWW= https://code.mpimet.mpg.de/projects/cgribex LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/checkmol/Makefile b/science/checkmol/Makefile index 8175edb8abbd..29d1d71b9f80 100644 --- a/science/checkmol/Makefile +++ b/science/checkmol/Makefile @@ -8,6 +8,7 @@ EXTRACT_SUFX= .pas MAINTAINER= acm@FreeBSD.org COMMENT= Analyze molecules for the presence of functional groups +WWW= https://homepage.univie.ac.at/norbert.haider/cheminf/cmmm.html LICENSE= GPLv2+ diff --git a/science/chemical-mime-data/Makefile b/science/chemical-mime-data/Makefile index c7481bf077df..857ed4df3454 100644 --- a/science/chemical-mime-data/Makefile +++ b/science/chemical-mime-data/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF/chemical-mime/${PORTNAME}/${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Collection of chemical MIME types for UNIX desktops +WWW= http://chemical-mime.sourceforge.net/ USES= gettext-tools gmake gnome pathfix pkgconfig shared-mime-info \ tar:bzip2 diff --git a/science/chemicalfun/Makefile b/science/chemicalfun/Makefile index c1735a1cde79..ef1286bd67cf 100644 --- a/science/chemicalfun/Makefile +++ b/science/chemicalfun/Makefile @@ -6,6 +6,7 @@ DISTFILES= ${PORTNAME}-${DISTVERSION}${EXTRACT_SUFX}:src MAINTAINER= yuri@FreeBSD.org COMMENT= C++ library for working with chemical reactions and formulas +WWW= https://bitbucket.org/gems4/chemicalfun/src/master/ BUILD_DEPENDS= nlohmann-json>0:devel/nlohmann-json \ spdlog>0:devel/spdlog diff --git a/science/chemps2/Makefile b/science/chemps2/Makefile index 6007fc8be2da..ed0271890e36 100644 --- a/science/chemps2/Makefile +++ b/science/chemps2/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Spin-adapted implementation of DMRG for ab initio quantum chemistry +WWW= https://github.com/SebWouters/CheMPS2 LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/chemtool-devel/Makefile b/science/chemtool-devel/Makefile index 08576399e8ea..f1ff06b0fdb0 100644 --- a/science/chemtool-devel/Makefile +++ b/science/chemtool-devel/Makefile @@ -8,6 +8,7 @@ DISTNAME= ct17a15 MAINTAINER= eduardo@FreeBSD.org COMMENT= Drawing organic molecules easily and store them (developer version) +WWW= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ LICENSE= GPLv2 diff --git a/science/chemtool/Makefile b/science/chemtool/Makefile index 55d1ce1529b8..48367ca24acd 100644 --- a/science/chemtool/Makefile +++ b/science/chemtool/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ MAINTAINER= yuri@FreeBSD.org COMMENT= Draw organic molecules easily and store them +WWW= http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/chimes-calculator/Makefile b/science/chimes-calculator/Makefile index b637a98d97bc..7168c6be12bc 100644 --- a/science/chimes-calculator/Makefile +++ b/science/chimes-calculator/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Chebyshev Interaction Model for Efficient Simulation +WWW= https://github.com/rk-lindsey/chimes_calculator LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/chrono/Makefile b/science/chrono/Makefile index 4cd6c943a14d..ae2c99dbe460 100644 --- a/science/chrono/Makefile +++ b/science/chrono/Makefile @@ -9,6 +9,7 @@ PATCHFILES= 74df5c76d8d475818138a9a16ceccbd6f326247c.patch:-p1 # https://github. MAINTAINER= yuri@FreeBSD.org COMMENT= C++ library for multi-physics simulation +WWW= https://projectchrono.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/clhep/Makefile b/science/clhep/Makefile index 2674db91b1c6..a5619a8e2d73 100644 --- a/science/clhep/Makefile +++ b/science/clhep/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://proj-clhep.web.cern.ch/proj-clhep/DISTRIBUTION/tarFiles/ MAINTAINER= bofh@FreeBSD.org COMMENT= Object-oriented toolkit for particle physics applications by CERN +WWW= http://wwwasd.web.cern.ch/wwwasd/lhc++/clhep/index.html LICENSE= GPLv3 LGPL3 LICENSE_COMB= multi diff --git a/science/clipper/Makefile b/science/clipper/Makefile index ec39e712f4e0..5f706b4d0587 100644 --- a/science/clipper/Makefile +++ b/science/clipper/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/ MAINTAINER= yuri@FreeBSD.org COMMENT= Libraries for the organisation of crystallographic data +WWW= http://www.ysbl.york.ac.uk/~cowtan/clipper/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/code_saturne/Makefile b/science/code_saturne/Makefile index ad5c40077367..65c5f58151d5 100644 --- a/science/code_saturne/Makefile +++ b/science/code_saturne/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science parallel MAINTAINER= thierry@FreeBSD.org COMMENT= EDF's general purpose Computational Fluid Dynamics (CFD) software +WWW= https://www.code-saturne.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/colt/Makefile b/science/colt/Makefile index fe08d95ac773..edc834d59082 100644 --- a/science/colt/Makefile +++ b/science/colt/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://acs.lbl.gov/software/colt/colt-download/releases/ MAINTAINER= ports@FreeBSD.org COMMENT= Java package for scalable scientific and technical computing +WWW= https://acs.lbl.gov/~hoschek/colt/ USE_JAVA= yes WRKSRC= ${WRKDIR}/${PORTNAME} diff --git a/science/conduit/Makefile b/science/conduit/Makefile index ca1946e2b6f5..64fd6d35f3a9 100644 --- a/science/conduit/Makefile +++ b/science/conduit/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Simplified data exchange for HPC simulations +WWW= https://github.com/LLNL/conduit LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/coordgenlibs/Makefile b/science/coordgenlibs/Makefile index 30d606399232..e18ef600ab34 100644 --- a/science/coordgenlibs/Makefile +++ b/science/coordgenlibs/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Schrodinger-developed 2D coordinate generation +WWW= https://github.com/schrodinger/coordgenlibs LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/cp2k-data/Makefile b/science/cp2k-data/Makefile index 8b18ed72d9ac..bf58146e420d 100644 --- a/science/cp2k-data/Makefile +++ b/science/cp2k-data/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Data for cp2k quantum chemistry package +WWW= https://www.cp2k.org/ LICENSE= GPLv2+ diff --git a/science/cp2k/Makefile b/science/cp2k/Makefile index 69821edbdbca..f772fb390b7e 100644 --- a/science/cp2k/Makefile +++ b/science/cp2k/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry and solid state physics software package +WWW= https://www.cp2k.org/ LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/crf++/Makefile b/science/crf++/Makefile index 4d7213a3fc93..53ee1a38372a 100644 --- a/science/crf++/Makefile +++ b/science/crf++/Makefile @@ -10,6 +10,7 @@ PATCHFILES= 15.patch:-p1:pr \ MAINTAINER= ports@FreeBSD.org COMMENT= Yet Another CRF toolkit +WWW= https://taku910.github.io/crfpp/ LICENSE= BSD3CLAUSE LGPL21+ LICENSE_COMB= dual diff --git a/science/csvtk/Makefile b/science/csvtk/Makefile index 7fc5e92d8d7d..68bebd788b33 100644 --- a/science/csvtk/Makefile +++ b/science/csvtk/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= jwb@FreeBSD.org COMMENT= Cross-platform and ultrafast toolkit for CSV/TSV processing +WWW= https://bioinf.shenwei.me/csvtk/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/dakota/Makefile b/science/dakota/Makefile index 47ff0fb2ca04..3bb44c565564 100644 --- a/science/dakota/Makefile +++ b/science/dakota/Makefile @@ -8,6 +8,7 @@ DISTFILES= ${DISTNAME}${EXTRACT_SUFX} MAINTAINER= yuri@FreeBSD.org COMMENT= Interface between analysis codes & iterative systems analysis methods +WWW= https://dakota.sandia.gov/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/dalton/Makefile b/science/dalton/Makefile index 2b8665d13322..95750c0b7434 100644 --- a/science/dalton/Makefile +++ b/science/dalton/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Powerful molecular electronic structure program for quantum chemistry +WWW= https://daltonprogram.org/ LICENSE= LGPL21 diff --git a/science/dcl/Makefile b/science/dcl/Makefile index 0f50680e6ef1..ed481270bff0 100644 --- a/science/dcl/Makefile +++ b/science/dcl/Makefile @@ -8,6 +8,7 @@ MASTER_SITES= http://www.gfd-dennou.org/library/dcl/ \ MAINTAINER= murashin@gfd-dennou.org COMMENT= Scientific graphic library for geoscience +WWW= https://www.gfd-dennou.org/arch/dcl/ # Converted from RESTRICTED LICENSE= dcl diff --git a/science/devisor/Makefile b/science/devisor/Makefile index 445d4145495a..fe76dfe1e6f9 100644 --- a/science/devisor/Makefile +++ b/science/devisor/Makefile @@ -7,6 +7,7 @@ DISTNAME= devisor${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Design and Visualization Software Resource for FeatFlow +WWW= http://www.featflow.de/ USE_JAVA= yes NO_BUILD= yes # Sources are available though diff --git a/science/dftbplus/Makefile b/science/dftbplus/Makefile index 717a9386b38e..df85ca4a6d1b 100644 --- a/science/dftbplus/Makefile +++ b/science/dftbplus/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= DFTB+: Package for performing fast atomistic simulations +WWW= https://dftbplus.org/ LICENSE= GPLv3 # main code is under LGPL3+, the bundled dftd3-lib is under GPLv1+, this makes the result GPLv3 (based on https://www.gnu.org/licenses/gpl-faq.html#AllCompatibility) diff --git a/science/dftd4/Makefile b/science/dftd4/Makefile index 096201fb82d4..8ba007e92ef3 100644 --- a/science/dftd4/Makefile +++ b/science/dftd4/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Atomic-charge dependent london dispersion correction computation +WWW= https://www.chemie.uni-bonn.de/pctc/mulliken-center/software/dftd4 LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/dimod/Makefile b/science/dimod/Makefile index 21da4eff0726..0d7c47051874 100644 --- a/science/dimod/Makefile +++ b/science/dimod/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science python MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Shared API for QUBO/Ising samplers +WWW= https://github.com/dwavesystems/dimod LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/dirac/Makefile b/science/dirac/Makefile index e38c100d0775..d9b6b962724c 100644 --- a/science/dirac/Makefile +++ b/science/dirac/Makefile @@ -7,6 +7,7 @@ DISTNAME= ${PORTNAME:tu}-${DISTVERSION}-Source MAINTAINER= yuri@FreeBSD.org COMMENT= Program for atomic & molecular relativistic all-electron calculations +WWW= http://diracprogram.org/doku.php LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/dkh/Makefile b/science/dkh/Makefile index 2a18b0109bf9..bcf5fe7d65de 100644 --- a/science/dkh/Makefile +++ b/science/dkh/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction +WWW= http://www.reiher.ethz.ch/software/dkh-x2c.html LICENSE= GPLv3 diff --git a/science/dlib-cpp/Makefile b/science/dlib-cpp/Makefile index 5990db37d845..ad5ca634f041 100644 --- a/science/dlib-cpp/Makefile +++ b/science/dlib-cpp/Makefile @@ -6,6 +6,7 @@ PKGNAMESUFFIX= -cpp MAINTAINER= arrowd@FreeBSD.org COMMENT= Machine learning framework written in C++ +WWW= http://dlib.net LICENSE= BSL LICENSE_FILE= ${WRKSRC}/dlib/LICENSE.txt diff --git a/science/drawxtl/Makefile b/science/drawxtl/Makefile index 7f9f951a5eda..1b66c6bca559 100644 --- a/science/drawxtl/Makefile +++ b/science/drawxtl/Makefile @@ -7,6 +7,7 @@ DISTNAME= ${PORTNAME}${DISTVERSION:S/.//} MAINTAINER= yuri@FreeBSD.org COMMENT= Crystal structure visualization tool +WWW= http://www.lwfinger.net/drawxtl/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/dvc/Makefile b/science/dvc/Makefile index 7d5cbbeb571e..a0560830386b 100644 --- a/science/dvc/Makefile +++ b/science/dvc/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= CHEESESHOP MAINTAINER= yuri@FreeBSD.org COMMENT= Git for data scientists: manage code and data together +WWW= https://dvc.org/ LICENSE= APACHE20 diff --git a/science/dwave-preprocessing/Makefile b/science/dwave-preprocessing/Makefile index e6f53ef8c8e8..193999807000 100644 --- a/science/dwave-preprocessing/Makefile +++ b/science/dwave-preprocessing/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science # quantum-computing MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Preprocessing tools to aid in solving binary quadratic models +WWW= https://github.com/dwavesystems/dwave-preprocessing LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/dynare/Makefile b/science/dynare/Makefile index 2e36f970c827..bf7ea4901e96 100644 --- a/science/dynare/Makefile +++ b/science/dynare/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://www.dynare.org/release/source/ MAINTAINER= yuri@FreeBSD.org COMMENT= Software platform for handling a wide class of economic models +WWW= https://www.dynare.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/eccodes/Makefile b/science/eccodes/Makefile index abb8a9cf2efe..c77cd623838b 100644 --- a/science/eccodes/Makefile +++ b/science/eccodes/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= https://confluence.ecmwf.int/download/attachments/45757960/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= ECMWF API for WMO FM-92 GRIB and FM-94 BUFR messages +WWW= https://confluence.ecmwf.int/display/ECC LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/elk/Makefile b/science/elk/Makefile index e3c5d4de759d..50ef8d1a72d7 100644 --- a/science/elk/Makefile +++ b/science/elk/Makefile @@ -7,6 +7,7 @@ DIST_SUBDIR= ${PORTNAME}${PKGNAMESUFFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= All-electron full-potential linearised augmented-planewave code +WWW= http://elk.sourceforge.net/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/elmerfem/Makefile b/science/elmerfem/Makefile index 69c198240fb5..e28d39ab3582 100644 --- a/science/elmerfem/Makefile +++ b/science/elmerfem/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= henrik@gulbra.net COMMENT= Multiphysical simulation software +WWW= https://www.csc.fi/web/elmer LICENSE= GPLv2 diff --git a/science/epte/Makefile b/science/epte/Makefile index 40138e16e187..2e0b2f18d78f 100644 --- a/science/epte/Makefile +++ b/science/epte/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.toddmiller.com/epte/ MAINTAINER= ports@FreeBSD.org COMMENT= Electronic Periodic Table of the Elements +WWW= http://www.toddmiller.com/epte/ USES= ncurses MAKEFILE= makefile diff --git a/science/erd/Makefile b/science/erd/Makefile index fd499bde5c33..45d6017c712a 100644 --- a/science/erd/Makefile +++ b/science/erd/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= AcesIII electron repulsion integrals +WWW= https://github.com/psi4/erd LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/ergo/Makefile b/science/ergo/Makefile index b787a939e117..b6e23913c386 100644 --- a/science/ergo/Makefile +++ b/science/ergo/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= http://www.ergoscf.org/source/tarfiles/ MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry program for large-scale atomic calculations +WWW= http://www.ergoscf.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/erkale-pseudopotentials/Makefile b/science/erkale-pseudopotentials/Makefile index 06cf9cdb66f2..242ed0f9126c 100644 --- a/science/erkale-pseudopotentials/Makefile +++ b/science/erkale-pseudopotentials/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Pseudopotentials for Erkale, the quantum chemistry program +WWW= https://github.com/susilehtola/erkale LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/erkale/Makefile b/science/erkale/Makefile index cd4798bf4a36..776388757f96 100644 --- a/science/erkale/Makefile +++ b/science/erkale/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry program to solve the electronic structure of atoms +WWW= https://github.com/susilehtola/erkale LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/fastcap/Makefile b/science/fastcap/Makefile index 09e81e7f07b1..390373ef0b62 100644 --- a/science/fastcap/Makefile +++ b/science/fastcap/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= http://www.wrcad.com/ftp/pub/ LOCAL/bf MAINTAINER= ports@FreeBSD.org COMMENT= Three-dimensional capacitance extraction program +WWW= https://www.rle.mit.edu/cpg/research_codes.htm LICENSE= FASTCAP LICENSE_NAME= fastcap license diff --git a/science/fasthenry/Makefile b/science/fasthenry/Makefile index f2a8b297652b..10e88a68c5fd 100644 --- a/science/fasthenry/Makefile +++ b/science/fasthenry/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= http://www.wrcad.com/ftp/pub/ LOCAL/bf MAINTAINER= ports@FreeBSD.org COMMENT= Multipole-accelerated inductance analysis program +WWW= https://www.rle.mit.edu/cpg/research_codes.htm BROKEN_aarch64= Fails to link: missing sbrk BROKEN_riscv64= Fails to link: missing sbrk diff --git a/science/fastjet/Makefile b/science/fastjet/Makefile index d230a08fcee6..3f7f5d44404a 100644 --- a/science/fastjet/Makefile +++ b/science/fastjet/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://fastjet.fr/repo/ MAINTAINER= yuri@FreeBSD.org COMMENT= Package for jet finding in pp and e+e- collisions +WWW= https://fastjet.fr/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/fisicalab/Makefile b/science/fisicalab/Makefile index f1a0644ead1f..8f78eaf5e86c 100644 --- a/science/fisicalab/Makefile +++ b/science/fisicalab/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SAVANNAH MAINTAINER= ports@FreeBSD.org COMMENT= Physics simulation program for educational use +WWW= https://www.nongnu.org/fisicalab/ LICENSE= GPLv3 diff --git a/science/fleur/Makefile b/science/fleur/Makefile index c81b6d9dd363..c3d0f9524592 100644 --- a/science/fleur/Makefile +++ b/science/fleur/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= FLAPW code for atomic computations in quantum chemistry and physics +WWW= https://www.flapw.de/master/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/frontistr/Makefile b/science/frontistr/Makefile index b0cff34669a0..dddc7fd9c04a 100644 --- a/science/frontistr/Makefile +++ b/science/frontistr/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science cad MAINTAINER= thierry@FreeBSD.org COMMENT= Large-Scale Parallel FEM Program for Nonlinear Structural Analysis +WWW= https://gitlab.com/FrontISTR-Commons/FrontISTR LICENSE= MIT diff --git a/science/fsom/Makefile b/science/fsom/Makefile index fa037de07bf1..cdc3b45ad331 100644 --- a/science/fsom/Makefile +++ b/science/fsom/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= jwb@FreeBSD.org COMMENT= Tiny C library for managing SOM (Self-Organizing Maps) neural networks +WWW= https://github.com/ekg/fsom LICENSE= GPLv3 diff --git a/science/fvcom/Makefile b/science/fvcom/Makefile index daf23d2da69f..1ece2cd699bb 100644 --- a/science/fvcom/Makefile +++ b/science/fvcom/Makefile @@ -8,6 +8,7 @@ DIST_SUBDIR= fvcom MAINTAINER= jwb@FreeBSD.org COMMENT= Unstructured Grid Finite Volume Coastal Ocean Model +WWW= http://fvcom.smast.umassd.edu/FVCOM/index.html # Converted from RESTRICTED LICENSE= fvcom diff --git a/science/gabedit/Makefile b/science/gabedit/Makefile index b75fc5200449..2812aa358110 100644 --- a/science/gabedit/Makefile +++ b/science/gabedit/Makefile @@ -7,6 +7,7 @@ DISTNAME= GabeditSrc${DISTVERSION:C/([0-9])\.([0-9])\.([0-9])-([0-9])/\1\2\3_\4/ MAINTAINER= yuri@FreeBSD.org COMMENT= Graphical user interface for several chemistry software packages +WWW= http://gabedit.sourceforge.net/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/License diff --git a/science/gamess-us/Makefile b/science/gamess-us/Makefile index 3e22bf7a348b..45850271454e 100644 --- a/science/gamess-us/Makefile +++ b/science/gamess-us/Makefile @@ -7,6 +7,7 @@ DISTNAME= gamess-current MAINTAINER= yuri@FreeBSD.org COMMENT= General Atomic and Molecular Electronic Structure System (US) +WWW= https://www.msg.chem.iastate.edu/gamess/ LICENSE= GAMESS_LICENSE LICENSE_NAME= GAMESS User License Agreement diff --git a/science/gbtolib/Makefile b/science/gbtolib/Makefile index 20ba04f40e0b..4fffc22a24ef 100644 --- a/science/gbtolib/Makefile +++ b/science/gbtolib/Makefile @@ -7,6 +7,7 @@ DISTNAME= GBTOLib-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= High-performance library for evaluation of molecular integrals +WWW= https://zenodo.org/record/5798035 #.Yo1sazXMKV4 LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/gchemutils/Makefile b/science/gchemutils/Makefile index 5e72d89168e1..515404540739 100644 --- a/science/gchemutils/Makefile +++ b/science/gchemutils/Makefile @@ -7,6 +7,7 @@ DISTNAME= gnome-chemistry-utils-${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= C++ classes and Gtk3 widgets related to chemistry +WWW= https://www.nongnu.org/gchemutils/ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/gdma/Makefile b/science/gdma/Makefile index 85f3456c2b5a..f6c77be58a91 100644 --- a/science/gdma/Makefile +++ b/science/gdma/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Anthony Stone's Gaussian Distributed Multipole Analysis +WWW= https://github.com/psi4/gdma LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/getdp/Makefile b/science/getdp/Makefile index 810aafe2b70d..31b8136c78a4 100644 --- a/science/getdp/Makefile +++ b/science/getdp/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}-${PORTVERSION}-source MAINTAINER= stephen@FreeBSD.org COMMENT= Rather general finite element solver using mixed finite elements +WWW= https://www.geuz.org/getdp/ LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/ghemical/Makefile b/science/ghemical/Makefile index 8e56f8898907..cbd926835e15 100644 --- a/science/ghemical/Makefile +++ b/science/ghemical/Makefile @@ -7,6 +7,7 @@ MASTER_SITE_SUBDIR= release20111012 current MAINTAINER= yuri@FreeBSD.org COMMENT= Computational chemistry software package +WWW= https://www.bioinformatics.org/ghemical/ghemical/index.html LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/ghmm/Makefile b/science/ghmm/Makefile index ad0d5e6c5521..e13f5da2b582 100644 --- a/science/ghmm/Makefile +++ b/science/ghmm/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${DISTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= General Hidden Markov Model Library in C +WWW= http://ghmm.sourceforge.net/ LICENSE= GPLv3 diff --git a/science/gnudatalanguage/Makefile b/science/gnudatalanguage/Makefile index 3b1195344a63..4ada09ae4468 100644 --- a/science/gnudatalanguage/Makefile +++ b/science/gnudatalanguage/Makefile @@ -9,6 +9,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= thierry@FreeBSD.org COMMENT?= Free IDL-compatible incremental compiler +WWW= https://github.com/gnudatalanguage/gdl LICENSE= GPLv2 diff --git a/science/gpaw-setups/Makefile b/science/gpaw-setups/Makefile index e2e74a1bef07..866edc89b0ad 100644 --- a/science/gpaw-setups/Makefile +++ b/science/gpaw-setups/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://wiki.fysik.dtu.dk/gpaw-files/ MAINTAINER= yuri@FreeBSD.org COMMENT= Setups (data files) for py-gpaw, the DFT quantum chemistry software +WWW= https://wiki.fysik.dtu.dk/gpaw/setups/setups.html LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/gramps/Makefile b/science/gramps/Makefile index bcff87280490..6da1398012de 100644 --- a/science/gramps/Makefile +++ b/science/gramps/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science gnome python MAINTAINER= ports@FreeBSD.org COMMENT= GTK3-based genealogy program +WWW= https://gramps-project.org/ LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/grib_api/Makefile b/science/grib_api/Makefile index 7e834c9d519d..3ba49620c3f2 100644 --- a/science/grib_api/Makefile +++ b/science/grib_api/Makefile @@ -8,6 +8,7 @@ MASTER_SITES= https://confluence.ecmwf.int/download/attachments/3473437/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= ECMWF API for WMO FM-92 GRIB messages +WWW= https://confluence.ecmwf.int/display/GRIB LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/gromacs/Makefile b/science/gromacs/Makefile index 6a48218edb82..a842a929cb64 100644 --- a/science/gromacs/Makefile +++ b/science/gromacs/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= ftp://ftp.gromacs.org/pub/gromacs/ MAINTAINER= yuri@FreeBSD.org COMMENT= Compute molecular dynamics +WWW= https://www.gromacs.org/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/gsmc/Makefile b/science/gsmc/Makefile index 158ce25bae7c..5802f6c8db56 100644 --- a/science/gsmc/Makefile +++ b/science/gsmc/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.qsl.net/ik5nax/ MAINTAINER= hamradio@FreeBSD.org COMMENT= Smith chart program for impedance matching +WWW= https://www.qsl.net/ik5nax LICENSE= GPLv2 diff --git a/science/gtamsanalyzer/Makefile b/science/gtamsanalyzer/Makefile index d8b39bedd0d9..fee1b3681a44 100644 --- a/science/gtamsanalyzer/Makefile +++ b/science/gtamsanalyzer/Makefile @@ -7,6 +7,7 @@ DISTNAME= GTAMSAnalyzer.src.${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Qualitative Research Software for the Free World for GNUstep +WWW= http://tamsys.sourceforge.net/gtams/ LICENSE= GPLv2 diff --git a/science/h5utils/Makefile b/science/h5utils/Makefile index 062bdf2cf7f6..77f39ae930d8 100644 --- a/science/h5utils/Makefile +++ b/science/h5utils/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= aehlig@linta.de COMMENT= Set of utilities for visualization and conversion of HDF5 format +WWW= https://github.com/stevengj/h5utils LICENSE= MIT GPLv2 LICENSE_COMB= multi diff --git a/science/h5z-zfp/Makefile b/science/h5z-zfp/Makefile index a33716192436..b72ac01ff038 100644 --- a/science/h5z-zfp/Makefile +++ b/science/h5z-zfp/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Registered ZFP compression plugin for HDF5 +WWW= https://h5z-zfp.readthedocs.io/en/latest/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/harminv/Makefile b/science/harminv/Makefile index 100ce6ba334b..249c0064fac8 100644 --- a/science/harminv/Makefile +++ b/science/harminv/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://ab-initio.mit.edu/harminv/ MAINTAINER= devel@stasyan.com COMMENT= Solver of harmonic inversion +WWW= http://ab-initio.mit.edu/wiki/index.php/Harminv LIB_DEPENDS= libguile-2.2.so:lang/guile2 diff --git a/science/hdf/Makefile b/science/hdf/Makefile index 5ae3d901793f..df7d31ed0648 100644 --- a/science/hdf/Makefile +++ b/science/hdf/Makefile @@ -8,6 +8,7 @@ MASTER_SITES= http://www.hdfgroup.org/ftp/HDF/releases/HDF${PORTVERSION}/src/ \ MAINTAINER= ports@FreeBSD.org COMMENT= Hierarchical Data Format library (from NCSA) +WWW= https://www.hdfgroup.org/products/hdf4/ NOT_FOR_ARCHS= aarch64 armv6 armv7 NOT_FOR_ARCHS_REASON= fails to compile: no machine type has been defined diff --git a/science/hdf5-110/Makefile b/science/hdf5-110/Makefile index 458ad98fd309..de07b0c1bdbb 100644 --- a/science/hdf5-110/Makefile +++ b/science/hdf5-110/Makefile @@ -7,6 +7,7 @@ PKGNAMESUFFIX= -110 MAINTAINER= sunpoet@FreeBSD.org COMMENT= Hierarchical Data Format library (from NCSA) 1.10.x +WWW= https://www.hdfgroup.org/ LICENSE= BSD4CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/hdf5-18/Makefile b/science/hdf5-18/Makefile index 5f38edacd307..3c24f9321138 100644 --- a/science/hdf5-18/Makefile +++ b/science/hdf5-18/Makefile @@ -9,6 +9,7 @@ PKGNAMESUFFIX= -18 MAINTAINER= thierry@FreeBSD.org COMMENT= Hierarchical Data Format library (from NCSA) 1.8 +WWW= https://www.hdfgroup.org/HDF5/ LICENSE= BSD4CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/hdf5/Makefile b/science/hdf5/Makefile index 5782b8649294..5ceae0f76761 100644 --- a/science/hdf5/Makefile +++ b/science/hdf5/Makefile @@ -7,6 +7,7 @@ DISTNAME= CMake-hdf5-${PORTVERSION} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Hierarchical Data Format library (from NCSA) (latest) +WWW= https://www.hdfgroup.org/ LICENSE= BSD4CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/healpix/Makefile b/science/healpix/Makefile index c577450397c0..cf058d23f85b 100644 --- a/science/healpix/Makefile +++ b/science/healpix/Makefile @@ -8,6 +8,7 @@ DISTNAME= Healpix_${DISTVERSIONFULL} MAINTAINER= yuri@FreeBSD.org COMMENT= Software for pixelization, visualization, etc of data on the sphere +WWW= https://healpix.jpl.nasa.gov/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/helfem/Makefile b/science/helfem/Makefile index 5d61644621ab..6f9725df90f2 100644 --- a/science/helfem/Makefile +++ b/science/helfem/Makefile @@ -8,6 +8,7 @@ PATCHFILES= 4c0196c3ef3f254a22030eda787105c8a48df919.patch:-p1 # https://github. MAINTAINER= yuri@FreeBSD.org COMMENT= Finite element methods for electronic structure calculations +WWW= https://github.com/susilehtola/HelFEM LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/hepmc3/Makefile b/science/hepmc3/Makefile index f8d96b294c4f..e69ed4322453 100644 --- a/science/hepmc3/Makefile +++ b/science/hepmc3/Makefile @@ -6,6 +6,7 @@ DISTNAME= HepMC3-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Event record for High Energy Physics Monte Carlo generators/simulation +WWW= https://hepmc.web.cern.ch/hepmc/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/highfive/Makefile b/science/highfive/Makefile index 8e155277968f..5fdfd006f074 100644 --- a/science/highfive/Makefile +++ b/science/highfive/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science devel MAINTAINER= yuri@FreeBSD.org COMMENT= Header-only C++ HDF5 interface +WWW= https://github.com/BlueBrain/HighFive LICENSE= BSL LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/hypre/Makefile b/science/hypre/Makefile index ce05ff4ce36b..c69c0184e04d 100644 --- a/science/hypre/Makefile +++ b/science/hypre/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Scalable Linear Solvers and Multigrid Methods +WWW= https://computing.llnl.gov/projects/hypre-scalable-linear-solvers-multigrid-methods LICENSE= APACHE20 MIT LICENSE_COMB= dual diff --git a/science/iboview/Makefile b/science/iboview/Makefile index d711fdceae5c..ef39b8c58428 100644 --- a/science/iboview/Makefile +++ b/science/iboview/Makefile @@ -7,6 +7,7 @@ DISTNAME= ibo-view.20150427 MAINTAINER= jmd@FreeBSD.org COMMENT= Program for analyzing molecular electronic structure +WWW= http://www.iboview.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/isaac-cfd/Makefile b/science/isaac-cfd/Makefile index 0fa304df5cc4..ac1751e5f195 100644 --- a/science/isaac-cfd/Makefile +++ b/science/isaac-cfd/Makefile @@ -9,6 +9,7 @@ EXTRACT_ONLY= ${PORTNAME}src.4_2${EXTRACT_SUFX} ${PORTNAME}mk.4_2${EXTRACT_SUFX} MAINTAINER= ports@FreeBSD.org COMMENT= Integrated Solution Algorithm for Arbitrary Configuration +WWW= http://isaac-cfd.sourceforge.net/ LICENSE= ISAAC LICENSE_NAME= ISAAC_LICENSE diff --git a/science/jdftx/Makefile b/science/jdftx/Makefile index 91532a7526ac..2be25efc96cc 100644 --- a/science/jdftx/Makefile +++ b/science/jdftx/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Software for joint density functional theory in chemistry +WWW= https://jdftx.org/ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/jmol/Makefile b/science/jmol/Makefile index 35c8d1c95c8e..8ce95eeadbb8 100644 --- a/science/jmol/Makefile +++ b/science/jmol/Makefile @@ -7,6 +7,7 @@ DISTFILES= ${PORTNAME}-${DISTVERSION}-full${EXTRACT_SUFX} MAINTAINER= yuri@FreeBSD.org COMMENT= Java 3D viewer for chemical structures +WWW= http://jsmol.sourceforge.net/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/jstrack/Makefile b/science/jstrack/Makefile index 62440e2d0eee..f2680aefc08e 100644 --- a/science/jstrack/Makefile +++ b/science/jstrack/Makefile @@ -7,6 +7,7 @@ DISTNAME= JStrack-${PORTVERSION} MAINTAINER= bofh@FreeBSD.org COMMENT= Freeware hurricane tracking program +WWW= https://www.jstrack.org/jstrack/ LICENSE= JStrack LICENSE_NAME= JStrack diff --git a/science/kalzium/Makefile b/science/kalzium/Makefile index bf58c8d90bdd..3c793c794b16 100644 --- a/science/kalzium/Makefile +++ b/science/kalzium/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science education kde kde-applications MAINTAINER= kde@FreeBSD.org COMMENT= Periodic table of elements for KDE +WWW= https://www.kde.org/applications/education/kalzium LICENSE= GPLv2 LGPL20 GFDL LICENSE_COMB= multi diff --git a/science/kim-api/Makefile b/science/kim-api/Makefile index f3847c98af73..6b67c89ade96 100644 --- a/science/kim-api/Makefile +++ b/science/kim-api/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://s3.openkim.org/kim-api/ MAINTAINER= yuri@FreeBSD.org COMMENT= Framework for reliable, reproducible, portable molecular simulations +WWW= https://openkim.org/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/LICENSE.LGPL diff --git a/science/kplib/Makefile b/science/kplib/Makefile index 640ae04db7a4..0ab61a218ba1 100644 --- a/science/kplib/Makefile +++ b/science/kplib/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Library for finding optimal Generalized Monkhorst-Pack k-points grid +WWW= https://gitlab.com/muellergroup/kplib LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/kst2/Makefile b/science/kst2/Makefile index 304916a2315d..70391638d64e 100644 --- a/science/kst2/Makefile +++ b/science/kst2/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= makc@FreeBSD.org COMMENT= Data viewing and plotting tool +WWW= https://kst-plot.kde.org LICENSE= GPLv2 GFDL LGPL20 LICENSE_COMB= multi diff --git a/science/lammps/Makefile b/science/lammps/Makefile index a642d6bee294..3d02aa3e8119 100644 --- a/science/lammps/Makefile +++ b/science/lammps/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Classical molecular dynamics code with a focus on materials modeling +WWW= https://lammps.sandia.gov/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/lamprop/Makefile b/science/lamprop/Makefile index 201794d4bcca..bfc677272319 100644 --- a/science/lamprop/Makefile +++ b/science/lamprop/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science python MAINTAINER= rsmith@xs4all.nl COMMENT= Calculates properties of fiber reinforced composites +WWW= https://rsmith.home.xs4all.nl/software/lamprop.html LICENSE= BSD2CLAUSE diff --git a/science/latte/Makefile b/science/latte/Makefile index ce18ff8abaee..8745adb234a9 100644 --- a/science/latte/Makefile +++ b/science/latte/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry: Density functional tight binding molecular dynamics +WWW= https://github.com/lanl/LATTE LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE_GPL-2.0 diff --git a/science/libaec/Makefile b/science/libaec/Makefile index 0ad0705cf2e3..8b20e379fa1c 100644 --- a/science/libaec/Makefile +++ b/science/libaec/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://gitlab.dkrz.de/k202009/libaec/uploads/45b10e42123edd26ab7b MAINTAINER= sunpoet@FreeBSD.org COMMENT= Adaptive entropy coding library +WWW= https://gitlab.dkrz.de/k202009/libaec LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/libccp4/Makefile b/science/libccp4/Makefile index 7fd915790bef..f0ca3f82e095 100644 --- a/science/libccp4/Makefile +++ b/science/libccp4/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= ftp://ftp.ccp4.ac.uk/opensource/ MAINTAINER= yuri@FreeBSD.org COMMENT= Protein X-ray crystallography toolkit +WWW= https://www.ccp4.ac.uk/ LICENSE= GPLv3 LGPL3 LICENSE_COMB= dual diff --git a/science/libcint/Makefile b/science/libcint/Makefile index f12afac04899..2902fba63d73 100644 --- a/science/libcint/Makefile +++ b/science/libcint/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= General GTO integrals for quantum chemistry +WWW= https://github.com/sunqm/libcint LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libctl/Makefile b/science/libctl/Makefile index 2c924658be97..284a38f254c3 100644 --- a/science/libctl/Makefile +++ b/science/libctl/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://github.com/NanoComp/libctl/releases/download/v${DISTVERSIO MAINTAINER= devel@stasyan.com COMMENT= Control Language Library +WWW= https://libctl.readthedocs.io/en/latest/ LICENSE= GPLv2 diff --git a/science/libecpint/Makefile b/science/libecpint/Makefile index a6b14dc410b0..4cb004701af9 100644 --- a/science/libecpint/Makefile +++ b/science/libecpint/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science devel MAINTAINER= yuri@FreeBSD.org COMMENT= Library for the evaluation of integrals over effective core potentials +WWW= https://github.com/robashaw/libecpint LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libefp/Makefile b/science/libefp/Makefile index 8a3338d2ab9b..e9f13eacef98 100644 --- a/science/libefp/Makefile +++ b/science/libefp/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Effective fragment potential method in quantum chemistry +WWW= https://libefp.github.io LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libgeodecomp/Makefile b/science/libgeodecomp/Makefile index c508e38f1437..121084a4edfd 100644 --- a/science/libgeodecomp/Makefile +++ b/science/libgeodecomp/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.libgeodecomp.org/archive/ MAINTAINER= kurt@kmk-computers.de COMMENT= Auto-parallelizing library for computer simulations +WWW= http://www.libgeodecomp.org/ LICENSE= BSL LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libgetar/Makefile b/science/libgetar/Makefile index 533bd4452b88..a82caf4978f0 100644 --- a/science/libgetar/Makefile +++ b/science/libgetar/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # physics MAINTAINER= yuri@FreeBSD.org COMMENT= Library to read and write GEneric Trajectory ARchives +WWW= https://github.com/glotzerlab/libgetar LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libghemical/Makefile b/science/libghemical/Makefile index 82d227fdd81e..f8e2886195b9 100644 --- a/science/libghemical/Makefile +++ b/science/libghemical/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= http://bioinformatics.org/ghemical/download/release20111012/ \ MAINTAINER= yuri@FreeBSD.org COMMENT= Support libraries of science/ghemical port +WWW= https://www.bioinformatics.org/ghemical/ghemical/index.html LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/libgridxc/Makefile b/science/libgridxc/Makefile index dd33c257b95c..2c5e2fcfe078 100644 --- a/science/libgridxc/Makefile +++ b/science/libgridxc/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}-${PORTNAME}-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Library to compute the exchange and correlation energy and potentials +WWW= https://gitlab.com/siesta-project/libraries/libgridxc LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/libint/Makefile b/science/libint/Makefile index f04b13024f75..8a839e98b6bb 100644 --- a/science/libint/Makefile +++ b/science/libint/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Evaluate the integrals in modern atomic and molecular theory +WWW= https://github.com/evaleev/libint LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libint2/Makefile b/science/libint2/Makefile index 5fbcccf1739b..732244bfb784 100644 --- a/science/libint2/Makefile +++ b/science/libint2/Makefile @@ -7,6 +7,7 @@ PKGNAMESUFFIX= 2 MAINTAINER= yuri@FreeBSD.org COMMENT= Evaluate the integrals in modern atomic and molecular theory +WWW= https://github.com/evaleev/libint LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libkml/Makefile b/science/libkml/Makefile index 0da5289f50f5..c59fc16cc70d 100644 --- a/science/libkml/Makefile +++ b/science/libkml/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= sunpoet@FreeBSD.org COMMENT= Reference implementation of OGC KML 2.2 +WWW= https://github.com/libkml/libkml LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/liblinear/Makefile b/science/liblinear/Makefile index 50ab5f1c1bb5..0efb9165cd19 100644 --- a/science/liblinear/Makefile +++ b/science/liblinear/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://www.csie.ntu.edu.tw/~cjlin/liblinear/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Library for Large Linear Classification +WWW= https://www.csie.ntu.edu.tw/~cjlin/liblinear/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/libmbd/Makefile b/science/libmbd/Makefile index 97d485329b3b..7e35d120a0b4 100644 --- a/science/libmbd/Makefile +++ b/science/libmbd/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://github.com/libmbd/libmbd/releases/download/${DISTVERSION}/ MAINTAINER= yuri@FreeBSD.org COMMENT= Many-body dispersion library +WWW= https://github.com/libmbd/libmbd LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libmsym/Makefile b/science/libmsym/Makefile index 9d2fe8fee669..0f5a8f695ce3 100644 --- a/science/libmsym/Makefile +++ b/science/libmsym/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Molecular point group symmetry library +WWW= https://github.com/mcodev31/libmsym LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libnegf/Makefile b/science/libnegf/Makefile index 06e10f4eb6d3..3662d277b32f 100644 --- a/science/libnegf/Makefile +++ b/science/libnegf/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Non Equilibrium Green's Functions library +WWW= https://github.com/libnegf/libnegf LICENSE= GPLv3 diff --git a/science/liboglappth/Makefile b/science/liboglappth/Makefile index 2022902e442a..966100d443a3 100644 --- a/science/liboglappth/Makefile +++ b/science/liboglappth/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= http://bioinformatics.org/ghemical/download/release20111012/ \ MAINTAINER= ports@FreeBSD.org COMMENT= Support libraries of science/ghemical port +WWW= http://www.uku.fi/~thassine/projects/ghemical/ GNU_CONFIGURE= yes INSTALL_TARGET= install-strip diff --git a/science/libquantum/Makefile b/science/libquantum/Makefile index 40d6993ec10a..fd3974293fd9 100644 --- a/science/libquantum/Makefile +++ b/science/libquantum/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.libquantum.de/files/ MAINTAINER= ports@FreeBSD.org COMMENT= C library for quantum computing and quantum simulation +WWW= http://www.libquantum.de/ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/libssm/Makefile b/science/libssm/Makefile index d3392d8d29c7..9ebb51ba1b1f 100644 --- a/science/libssm/Makefile +++ b/science/libssm/Makefile @@ -7,6 +7,7 @@ DISTNAME= ssm-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= C++ toolkit for superposition of macromolecules +WWW= https://launchpad.net/ssm LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/libsvm-python/Makefile b/science/libsvm-python/Makefile index 9452d69e76aa..33801711a519 100644 --- a/science/libsvm-python/Makefile +++ b/science/libsvm-python/Makefile @@ -2,6 +2,7 @@ PORTREVISION= 1 PKGNAMESUFFIX= -python MAINTAINER= ports@FreeBSD.org +WWW= https://www.csie.ntu.edu.tw/~cjlin/libsvm/ MASTERDIR= ${.CURDIR}/../../science/libsvm diff --git a/science/libsvm/Makefile b/science/libsvm/Makefile index 71f9263b1a3f..07f4f87b5f6c 100644 --- a/science/libsvm/Makefile +++ b/science/libsvm/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.csie.ntu.edu.tw/~cjlin/libsvm/ \ MAINTAINER?= iblis@hs.ntnu.edu.tw COMMENT= Library for Support Vector Machines +WWW= https://www.csie.ntu.edu.tw/~cjlin/libsvm/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/libtensorflow1/Makefile b/science/libtensorflow1/Makefile index ce9aa78c83ff..671cceac8cf9 100644 --- a/science/libtensorflow1/Makefile +++ b/science/libtensorflow1/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= freebsd-ports@otoh.org COMMENT= C API for TensorFlow, an open source platform for machine learning +WWW= https://www.tensorflow.org/install/lang_c LICENSE= APACHE20 THIRD_PARTY_TF_C_LICENSES LICENSE_COMB= multi diff --git a/science/libvdwxc/Makefile b/science/libvdwxc/Makefile index d8c80ce0b51f..9358682a227d 100644 --- a/science/libvdwxc/Makefile +++ b/science/libvdwxc/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Van der Waals density functional (DFT) library +WWW= https://libvdwxc.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/libxc/Makefile b/science/libxc/Makefile index 8db4cfcd5113..4221ddb8ba8f 100644 --- a/science/libxc/Makefile +++ b/science/libxc/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://www.tddft.org/programs/${PORTNAME}/down/${DISTVERSION}/ MAINTAINER= jmd@FreeBSD.org COMMENT= Library of exchange-correlation functionals for DFT +WWW= https://www.tddft.org/programs/libxc/ LICENSE= LGPL3+ LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/liggghts/Makefile b/science/liggghts/Makefile index 8725ba0b32f1..0804f65620a0 100644 --- a/science/liggghts/Makefile +++ b/science/liggghts/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Discrete element method particle simulation software +WWW= https://www.cfdem.com/liggghts-open-source-discrete-element-method-particle-simulation-code LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/linux-zotero/Makefile b/science/linux-zotero/Makefile index 8cf918746899..d87e0c23bd9a 100644 --- a/science/linux-zotero/Makefile +++ b/science/linux-zotero/Makefile @@ -12,6 +12,7 @@ EXTRACT_ONLY= ${_MAIN_DISTFILE} MAINTAINER= 0mp@FreeBSD.org COMMENT= Reference management for bibliographic data and research materials +WWW= https://www.zotero.org/ LICENSE= AGPLv3 LICENSE_FILE= ${WRKDIR}/COPYING diff --git a/science/luscus/Makefile b/science/luscus/Makefile index f5d55ad3fae9..63950f03dfc9 100644 --- a/science/luscus/Makefile +++ b/science/luscus/Makefile @@ -7,6 +7,7 @@ DISTNAME= ${PORTNAME}_${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Molecular editor and viewer +WWW= https://sourceforge.net/projects/luscus/ LICENSE= AFL LICENSE_NAME= Academic Free License diff --git a/science/madness/Makefile b/science/madness/Makefile index d5d9de96fde0..43f56b2fa268 100644 --- a/science/madness/Makefile +++ b/science/madness/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Multiresolution adaptive numeric environment for scientific simulation +WWW= https://github.com/m-a-d-n-e-s-s/madness LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/maeparser/Makefile b/science/maeparser/Makefile index c02c289d2ef1..f9de1c509b1d 100644 --- a/science/maeparser/Makefile +++ b/science/maeparser/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Parser for Schrodinger Maestro files +WWW= https://github.com/schrodinger/maeparser LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/massxpert/Makefile b/science/massxpert/Makefile index cf46abf5111f..695c763c27fe 100644 --- a/science/massxpert/Makefile +++ b/science/massxpert/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= salvadore@FreeBSD.org COMMENT= Software suite for (bio)chemists +WWW= http://www.msxpertsuite.org LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/mbdyn/Makefile b/science/mbdyn/Makefile index adc7ddb2d5aa..a62f75a96f9f 100644 --- a/science/mbdyn/Makefile +++ b/science/mbdyn/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://www.mbdyn.org/userfiles/downloads/ MAINTAINER= yuri@FreeBSD.org COMMENT= MultiBody Dynamics analysis system +WWW= https://www.mbdyn.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/mcstas-comps/Makefile b/science/mcstas-comps/Makefile index 1f461f178f44..51c09ca3a13a 100644 --- a/science/mcstas-comps/Makefile +++ b/science/mcstas-comps/Makefile @@ -7,6 +7,7 @@ DISTNAME= ${PORTNAME}-${PORTVERSION}-src MAINTAINER= erkn@fysik.dtu.dk COMMENT= Component Library for the McStas neutron ray tracing package +WWW= https://www.mcstas.org LICENSE= GPLv2 diff --git a/science/mcstas/Makefile b/science/mcstas/Makefile index f51ae031db8d..670cd12a0dd7 100644 --- a/science/mcstas/Makefile +++ b/science/mcstas/Makefile @@ -6,6 +6,7 @@ DISTNAME= mcstas-${PORTVERSION}-src MAINTAINER= erkn@fysik.dtu.dk COMMENT= Monte Carlo neutron ray tracing package +WWW= https://www.mcstas.org LICENSE= GPLv2 diff --git a/science/mctc-lib/Makefile b/science/mctc-lib/Makefile index c63b6c90e53a..d338ac794bb5 100644 --- a/science/mctc-lib/Makefile +++ b/science/mctc-lib/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Computation tool chain library to work with molecular structure data +WWW= https://grimme-lab.github.io/mctc-lib/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/mcxtrace-comps/Makefile b/science/mcxtrace-comps/Makefile index bad090594a93..c07a3e4a6d26 100644 --- a/science/mcxtrace-comps/Makefile +++ b/science/mcxtrace-comps/Makefile @@ -6,6 +6,7 @@ DISTNAME= mcxtrace-comps-${DISTVERSION}-src MAINTAINER= erkn@fysik.dtu.dk COMMENT= Component Library for the McXtrace X-ray tracing package +WWW= https://www.mcxtrace.org LICENSE= LGPL21+ diff --git a/science/mcxtrace/Makefile b/science/mcxtrace/Makefile index 742e0e21df40..bb6b07d648ba 100644 --- a/science/mcxtrace/Makefile +++ b/science/mcxtrace/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://download.mcxtrace.org/${PORTNAME}-${DISTVERSION}/unix/mcxtr MAINTAINER= erkn@fysik.dtu.dk COMMENT= Monte Carlo X-ray tracing package +WWW= https://www.mcxtrace.org LICENSE= LGPL21+ LICENSE_FILE= ${WRKSRC}/lib/LGPL diff --git a/science/mdynamix/Makefile b/science/mdynamix/Makefile index 93d73e56e300..70e120df0093 100644 --- a/science/mdynamix/Makefile +++ b/science/mdynamix/Makefile @@ -7,6 +7,7 @@ DISTNAME= md${DISTVERSION:S/.//g} MAINTAINER= yuri@FreeBSD.org COMMENT= General purpose molecular dynamics code +WWW= http://www.fos.su.se/~sasha/mdynamix/ LICENSE= GPLv2+ diff --git a/science/medit/Makefile b/science/medit/Makefile index a2f1dad0dcad..582da78fe296 100644 --- a/science/medit/Makefile +++ b/science/medit/Makefile @@ -8,6 +8,7 @@ EXTRACT_ONLY= ${SOURCETARB} MAINTAINER= thierry@FreeBSD.org COMMENT= Interactive meshes visualization +WWW= https://www.ljll.math.upmc.fr/frey/software.html #scivis LICENSE= None LICENSE_NAME= Special grant diff --git a/science/meep/Makefile b/science/meep/Makefile index 611b4ff3a0cc..4cb6aace1e02 100644 --- a/science/meep/Makefile +++ b/science/meep/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science cad MAINTAINER= yuri@FreeBSD.org COMMENT= Finite-difference time-domain software for electromagnetic simulations +WWW= https://github.com/NanoComp/meep LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/metaphysicl/Makefile b/science/metaphysicl/Makefile index 245d994813e6..241ae04955a7 100644 --- a/science/metaphysicl/Makefile +++ b/science/metaphysicl/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Metaprogramming, operator-overloaded classes for numerical simulations +WWW= https://github.com/libMesh/MetaPhysicL LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/minc2/Makefile b/science/minc2/Makefile index c20f099debd8..4d3ae192e619 100644 --- a/science/minc2/Makefile +++ b/science/minc2/Makefile @@ -8,6 +8,7 @@ PKGNAMESUFFIX= 2 MAINTAINER= ports@FreeBSD.org COMMENT= Medical Imaging NetCDF +WWW= https://www.bic.mni.mcgill.ca/ServicesSoftware/MINC LICENSE= MIT LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/mmdb2/Makefile b/science/mmdb2/Makefile index dbfa00cfb69c..f19bbf9fff95 100644 --- a/science/mmdb2/Makefile +++ b/science/mmdb2/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/ MAINTAINER= yuri@FreeBSD.org COMMENT= C++ toolkit for working with macromolecular coordinate files +WWW= https://launchpad.net/mmdb LICENSE= GPLv3 LGPL3 LICENSE_COMB= dual diff --git a/science/mmtf-cpp/Makefile b/science/mmtf-cpp/Makefile index a96b05d9f1d6..7f2a0556db98 100644 --- a/science/mmtf-cpp/Makefile +++ b/science/mmtf-cpp/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science biology MAINTAINER= yuri@FreeBSD.org COMMENT= C++ MMTF format API, decoder and encoder, for molecular structures +WWW= https://mmtf.rcsb.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/mol2ps/Makefile b/science/mol2ps/Makefile index 2f923f30eddf..4f29367affdb 100644 --- a/science/mol2ps/Makefile +++ b/science/mol2ps/Makefile @@ -9,6 +9,7 @@ DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} MAINTAINER= acm@FreeBSD.org COMMENT= Read molecular structure files and generate Postscript output +WWW= https://homepage.univie.ac.at/norbert.haider/cheminf/mol2ps.html LICENSE= GPLv2+ diff --git a/science/molgif/Makefile b/science/molgif/Makefile index 55cea9e4a55e..dfd8820e910f 100644 --- a/science/molgif/Makefile +++ b/science/molgif/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Tool to create GIF animations of molecules +WWW= https://github.com/ilyak/molgif LICENSE= ISCL LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/molscript/Makefile b/science/molscript/Makefile index fd23b44e9149..efbec7c216fd 100644 --- a/science/molscript/Makefile +++ b/science/molscript/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Display 3D molecules in schematic and detailed representations +WWW= https://kraulis.se/MolScript/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/../LICENSE.txt diff --git a/science/molsketch/Makefile b/science/molsketch/Makefile index d9a7c7343a9c..7f7824fe9e9d 100644 --- a/science/molsketch/Makefile +++ b/science/molsketch/Makefile @@ -8,6 +8,7 @@ DISTNAME= Molsketch-${DISTVERSIONFULL} MAINTAINER= yuri@FreeBSD.org COMMENT= 2D molecule editor +WWW= https://molsketch.sourceforge.net/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/mopac/Makefile b/science/mopac/Makefile index 307831a7c800..cd15f9982ca8 100644 --- a/science/mopac/Makefile +++ b/science/mopac/Makefile @@ -9,6 +9,7 @@ DISTNAME= mopac7-${MOPAC_SUBVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Semi-empirical (MNDO, etc.) molecular orbital calculation +WWW= https://bioinformatics.org/ghemical/ LICENSE= GPLv2+ diff --git a/science/mpb/Makefile b/science/mpb/Makefile index 6c5d4294b37b..9d27d7ff8b87 100644 --- a/science/mpb/Makefile +++ b/science/mpb/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://github.com/NanoComp/mpb/releases/download/v${DISTVERSION}/ MAINTAINER= rhurlin@FreeBSD.org COMMENT= MIT Photonic-Bands +WWW= https://mpb.readthedocs.io/en/latest/ LICENSE= GPLv2 diff --git a/science/mpqc/Makefile b/science/mpqc/Makefile index 3bc3f040ae34..01343110d953 100644 --- a/science/mpqc/Makefile +++ b/science/mpqc/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF MAINTAINER= yuri@FreeBSD.org COMMENT= Massively Parallel Quantum Chemistry Program +WWW= https://mpqc.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/msms/Makefile b/science/msms/Makefile index 0409b97d0e34..8c0f750be066 100644 --- a/science/msms/Makefile +++ b/science/msms/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME}_${ARCH_MSMS_DIST}Linux2_${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Program to efficiently compute molecular surfaces +WWW= http://mgltools.scripps.edu/downloads #msms LICENSE= MSMS_LICENSE LICENSE_NAME= MSMS License diff --git a/science/mstore/Makefile b/science/mstore/Makefile index 850a24eb2e0b..904553d3aed4 100644 --- a/science/mstore/Makefile +++ b/science/mstore/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Molecular structure store for testing +WWW= https://github.com/grimme-lab/mstore LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/multicharge/Makefile b/science/multicharge/Makefile index 5add9b77c1c1..6c7b4363ac04 100644 --- a/science/multicharge/Makefile +++ b/science/multicharge/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Electronegativity equilibration model for atomic partial charges +WWW= https://github.com/grimme-lab/mstore LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/multiwfn/Makefile b/science/multiwfn/Makefile index 897ba25a0fed..574b90953ccf 100644 --- a/science/multiwfn/Makefile +++ b/science/multiwfn/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Multifunctional wavefunction analysis for quantum chemistry +WWW= http://sobereva.com/multiwfn/index.html LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/namd/Makefile b/science/namd/Makefile index 72ea973a7246..f5456bddf8db 100644 --- a/science/namd/Makefile +++ b/science/namd/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME:tu}_${DISTVERSION}_Source MAINTAINER= yuri@FreeBSD.org COMMENT= Computer software for molecular dynamics simulation +WWW= https://www.ks.uiuc.edu/Research/namd/ LICENSE= NAMD_MOLECULAR_DYNAMICS_LICENSE LICENSE_NAME= NAMD Molecular Dynamics Software diff --git a/science/nest/Makefile b/science/nest/Makefile index 2111cb50f66c..13699df09d9e 100644 --- a/science/nest/Makefile +++ b/science/nest/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science biology # NEST is used in neuroscience MAINTAINER= yuri@FreeBSD.org COMMENT= Simulator for spiking neural network models +WWW= https://www.nest-simulator.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/netcdf-cxx/Makefile b/science/netcdf-cxx/Makefile index 5795531b5c42..05d418e5b5dc 100644 --- a/science/netcdf-cxx/Makefile +++ b/science/netcdf-cxx/Makefile @@ -8,6 +8,7 @@ DISTNAME= ${PORTNAME}4-${PORTVERSION} MAINTAINER= sunpoet@FreeBSD.org COMMENT= C++ library for machine-independent, array-oriented data access +WWW= https://www.unidata.ucar.edu/software/netcdf/ LICENSE= UCAR_UNIDATA LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/netcdf-fortran/Makefile b/science/netcdf-fortran/Makefile index 6ca685a29093..bf563cc941eb 100644 --- a/science/netcdf-fortran/Makefile +++ b/science/netcdf-fortran/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://downloads.unidata.ucar.edu/netcdf-fortran/${PORTVERSION}/ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Fortran library for machine-independent, array-oriented data access +WWW= https://www.unidata.ucar.edu/software/netcdf/ LICENSE= UCAR_UNIDATA LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/netcdf/Makefile b/science/netcdf/Makefile index 9e465b81f3e8..0efce9c6bdf5 100644 --- a/science/netcdf/Makefile +++ b/science/netcdf/Makefile @@ -8,6 +8,7 @@ MASTER_SITES= https://downloads.unidata.ucar.edu/netcdf-c/${PORTVERSION}/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= C library for machine-independent, array-oriented data access +WWW= https://www.unidata.ucar.edu/software/netcdf/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/nifticlib/Makefile b/science/nifticlib/Makefile index bb3b602080fc..94636f0b85cc 100644 --- a/science/nifticlib/Makefile +++ b/science/nifticlib/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF/niftilib/nifticlib/nifticlib_2_0_0 MAINTAINER= jwb@FreeBSD.org COMMENT= Neuroimaging Informatics Technology Initiative data format +WWW= https://nifti.nimh.nih.gov/ LICENSE= PD diff --git a/science/nlcglib/Makefile b/science/nlcglib/Makefile index f06b36ebe793..ee92518453d1 100644 --- a/science/nlcglib/Makefile +++ b/science/nlcglib/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Nonlinear CG methods for wave-function optimization in DFT +WWW= https://github.com/simonpintarelli/nlcglib LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/nwchem-data/Makefile b/science/nwchem-data/Makefile index e1b3ad66eadf..326ea3e4f223 100644 --- a/science/nwchem-data/Makefile +++ b/science/nwchem-data/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Data for NWChem, the computational chemistry software +WWW= https://nwchemgit.github.io/ LICENSE= ECL20 LICENSE_NAME= Educational Community License (ECL) 2.0 diff --git a/science/nwchem/Makefile b/science/nwchem/Makefile index b853680f871e..ac03a9f3c642 100644 --- a/science/nwchem/Makefile +++ b/science/nwchem/Makefile @@ -13,6 +13,7 @@ EXTRACT_ONLY= ${DISTNAME}.tar.gz MAINTAINER= yuri@FreeBSD.org COMMENT= High-performance computational chemistry software +WWW= https://nwchemgit.github.io/ LICENSE= ECL20 LICENSE_NAME= Educational Community License (ECL) 2.0 diff --git a/science/octopus/Makefile b/science/octopus/Makefile index adb62132296b..df47a8b0ff82 100644 --- a/science/octopus/Makefile +++ b/science/octopus/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://octopus-code.org/download/${DISTVERSION}/ MAINTAINER= yuri@FreeBSD.org COMMENT= Scientific program aimed at the ab initio virtual experimentation +WWW= https://octopus-code.org/wiki/Main_Page LICENSE= GPLv2 diff --git a/science/openbabel/Makefile b/science/openbabel/Makefile index 2b0d1655cf4b..4e18279f64ee 100644 --- a/science/openbabel/Makefile +++ b/science/openbabel/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= https://github.com/openbabel/openbabel/releases/download/openbabel MAINTAINER= yuri@FreeBSD.org COMMENT= Chemical toolbox designed to speak the many languages of chemical data +WWW= https://openbabel.org/wiki/Main_Page LICENSE= GPLv2+ diff --git a/science/openems/Makefile b/science/openems/Makefile index 00ead7021a10..3d297459af5d 100644 --- a/science/openems/Makefile +++ b/science/openems/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Electromagnetic field solver using the EC-FDTD method +WWW= https://openems.de/start/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/openkim-models/Makefile b/science/openkim-models/Makefile index 4b4ad02a05f0..3446ec05ee16 100644 --- a/science/openkim-models/Makefile +++ b/science/openkim-models/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://s3.openkim.org/archives/collection/ MAINTAINER= yuri@FreeBSD.org COMMENT= Open Knowledgebase of Interatomic Models +WWW= https://openkim.org/ LICENSE= CDDL LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/openmc/Makefile b/science/openmc/Makefile index cd00402d9fed..711a8836b6cf 100644 --- a/science/openmc/Makefile +++ b/science/openmc/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Monte Carlo neutron and photon transport simulation code +WWW= https://openmc.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/openmolcas/Makefile b/science/openmolcas/Makefile index 15e183a69e54..52cdaf1040ef 100644 --- a/science/openmolcas/Makefile +++ b/science/openmolcas/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry software package +WWW= https://gitlab.com/Molcas/OpenMolcas LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/openmx/Makefile b/science/openmx/Makefile index 3ab14546007a..0067a982e5fa 100644 --- a/science/openmx/Makefile +++ b/science/openmx/Makefile @@ -11,6 +11,7 @@ EXTRACT_ONLY= ${PORTNAME}${DISTVERSION:R}${EXTRACT_SUFX} MAINTAINER= yuri@FreeBSD.org COMMENT= Nanoscale material simulations using density functional theories (DFT) +WWW= http://www.openmx-square.org/ LICENSE= GPLv2 diff --git a/science/opensim-core/Makefile b/science/opensim-core/Makefile index c75ba78423ae..1b9bf1ca74b4 100644 --- a/science/opensim-core/Makefile +++ b/science/opensim-core/Makefile @@ -6,6 +6,7 @@ PKGNAMESUFFIX= -core MAINTAINER= yuri@FreeBSD.org COMMENT= Software for modeling of musculoskeletal structures +WWW= https://opensim.stanford.edu/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/opensph/Makefile b/science/opensph/Makefile index 5aec7fd4a68e..3ff40df51c62 100644 --- a/science/opensph/Makefile +++ b/science/opensph/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Library and graphical tools for running SPH and N-body simulations +WWW= https://gitlab.com/sevecekp/sph LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/opsin/Makefile b/science/opsin/Makefile index 203120ddbf9d..70a08be7aab8 100644 --- a/science/opsin/Makefile +++ b/science/opsin/Makefile @@ -7,6 +7,7 @@ DISTFILES= ${PORTNAME}-${DISTVERSION}${EXTRACT_SUFX}:src MAINTAINER= yuri@FreeBSD.org COMMENT= Open Parser for Systematic IUPAC Nomenclature of chemical names +WWW= https://bitbucket.org/dan2097/opsin/src/default/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/orthanc-dicomweb/Makefile b/science/orthanc-dicomweb/Makefile index c49a5d556918..90ad54d15356 100644 --- a/science/orthanc-dicomweb/Makefile +++ b/science/orthanc-dicomweb/Makefile @@ -21,6 +21,7 @@ EXTRACT_ONLY= OrthancDicomWeb-${PORTVERSION}.tar.gz MAINTAINER= maintainer.freebsd@xpoundit.com COMMENT= Orthanc plugin to bring support of the DICOMweb standard into Orthanc +WWW= https://www.orthanc-server.com/static.php?page=dicomweb LICENSE= AGPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/orthanc-mysql/Makefile b/science/orthanc-mysql/Makefile index 8d5757b56f2a..e1b992167177 100644 --- a/science/orthanc-mysql/Makefile +++ b/science/orthanc-mysql/Makefile @@ -13,6 +13,7 @@ EXTRACT_ONLY= OrthancMySQL-${PORTVERSION}.tar.gz MAINTAINER= maintainer.freebsd@xpoundit.com COMMENT= Orthanc plugin to use MySQL/MariaDB for indexing or storage +WWW= https://www.orthanc-server.com/static.php?page=mysql LICENSE= AGPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/orthanc-postgresql/Makefile b/science/orthanc-postgresql/Makefile index e9190b1cf64a..bcc70fadb6e6 100644 --- a/science/orthanc-postgresql/Makefile +++ b/science/orthanc-postgresql/Makefile @@ -13,6 +13,7 @@ EXTRACT_ONLY= OrthancPostgreSQL-${PORTVERSION}.tar.gz MAINTAINER= maintainer.freebsd@xpoundit.com COMMENT= Orthanc plugin to use PostgreSQL for indexing or storage +WWW= https://www.orthanc-server.com/static.php?page=postgresql LICENSE= AGPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/orthanc-webviewer/Makefile b/science/orthanc-webviewer/Makefile index 4ae12d09a710..bd1c157376f2 100644 --- a/science/orthanc-webviewer/Makefile +++ b/science/orthanc-webviewer/Makefile @@ -19,6 +19,7 @@ EXTRACT_ONLY= OrthancWebViewer-${PORTVERSION}.tar.gz MAINTAINER= maintainer.freebsd@xpoundit.com COMMENT= Orthanc plugin to extend Orthanc with a Web viewer of medical images +WWW= https://www.orthanc-server.com/static.php?page=web-viewer LICENSE= AGPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/orthanc/Makefile b/science/orthanc/Makefile index 2d362ece5e35..9da7ea6120bd 100644 --- a/science/orthanc/Makefile +++ b/science/orthanc/Makefile @@ -7,6 +7,7 @@ DISTNAME= Orthanc-${PORTVERSION} MAINTAINER= maintainer.freebsd@xpoundit.com COMMENT= Lightweight DICOM server for healthcare and medical research +WWW= https://www.orthanc-server.com/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/p5-Algorithm-SVMLight/Makefile b/science/p5-Algorithm-SVMLight/Makefile index 2bdfd14c8ca1..7bf54e8dac52 100644 --- a/science/p5-Algorithm-SVMLight/Makefile +++ b/science/p5-Algorithm-SVMLight/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl interface to SVMLight Machine-Learning Package +WWW= https://metacpan.org/release/Algorithm-SVMLight BUILD_DEPENDS= svmlight>=6.01_2:science/svmlight LIB_DEPENDS= libsvmlight.so:science/svmlight diff --git a/science/p5-Chemistry-3DBuilder/Makefile b/science/p5-Chemistry-3DBuilder/Makefile index 48aa4090a819..b23772241a7e 100644 --- a/science/p5-Chemistry-3DBuilder/Makefile +++ b/science/p5-Chemistry-3DBuilder/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Generate 3D coordinates from a connection table +WWW= https://metacpan.org/release/Chemistry-3DBuilder BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-File-SMILES>=0:science/p5-Chemistry-File-SMILES \ diff --git a/science/p5-Chemistry-Bond-Find/Makefile b/science/p5-Chemistry-Bond-Find/Makefile index 327c7c5c2bb4..f9de344c97cf 100644 --- a/science/p5-Chemistry-Bond-Find/Makefile +++ b/science/p5-Chemistry-Bond-Find/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Detect bonds in a molecule and assign formal bond orders +WWW= https://metacpan.org/release/Chemistry-Bond-Find LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Chemistry-Canonicalize/Makefile b/science/p5-Chemistry-Canonicalize/Makefile index b24c03812722..cb180b55bc32 100644 --- a/science/p5-Chemistry-Canonicalize/Makefile +++ b/science/p5-Chemistry-Canonicalize/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Number the atoms in a molecule in a unique way +WWW= https://metacpan.org/release/Chemistry-Canonicalize LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Chemistry-Elements/Makefile b/science/p5-Chemistry-Elements/Makefile index 3bf26eedbc7c..fe11d3d04077 100644 --- a/science/p5-Chemistry-Elements/Makefile +++ b/science/p5-Chemistry-Elements/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl extension for working with Chemical Elements +WWW= https://metacpan.org/release/Chemistry-Elements LICENSE= ART20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/p5-Chemistry-File-MDLMol/Makefile b/science/p5-Chemistry-File-MDLMol/Makefile index 2affdd0cfa77..22a431baf036 100644 --- a/science/p5-Chemistry-File-MDLMol/Makefile +++ b/science/p5-Chemistry-File-MDLMol/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= MDL molfile reader/write +WWW= https://metacpan.org/release/Chemistry-File-SMARTS BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Ring>=0:science/p5-Chemistry-Ring diff --git a/science/p5-Chemistry-File-Mopac/Makefile b/science/p5-Chemistry-File-Mopac/Makefile index c5524c69d81b..7fad7d65067b 100644 --- a/science/p5-Chemistry-File-Mopac/Makefile +++ b/science/p5-Chemistry-File-Mopac/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= MOPAC 6 input file reader/writer +WWW= https://metacpan.org/release/Chemistry-File-Mopac BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-InternalCoords>=0:science/p5-Chemistry-InternalCoords diff --git a/science/p5-Chemistry-File-PDB/Makefile b/science/p5-Chemistry-File-PDB/Makefile index 5bec922be47f..b88aad4f5019 100644 --- a/science/p5-Chemistry-File-PDB/Makefile +++ b/science/p5-Chemistry-File-PDB/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl module to read and write PDB files +WWW= https://metacpan.org/release/Chemistry-File-PDB BUILD_DEPENDS= ${RUN_DEPENDS} RUN_DEPENDS= p5-Chemistry-Mol>=0.37:science/p5-Chemistry-Mol \ diff --git a/science/p5-Chemistry-File-SLN/Makefile b/science/p5-Chemistry-File-SLN/Makefile index f28450afcebe..09e40f17b49c 100644 --- a/science/p5-Chemistry-File-SLN/Makefile +++ b/science/p5-Chemistry-File-SLN/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SLN linear notation parser/writer +WWW= https://metacpan.org/release/Chemistry-File-SLN BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Ring>=0:science/p5-Chemistry-Ring \ diff --git a/science/p5-Chemistry-File-SMARTS/Makefile b/science/p5-Chemistry-File-SMARTS/Makefile index e6280d27e04f..5bf5e7f4057b 100644 --- a/science/p5-Chemistry-File-SMARTS/Makefile +++ b/science/p5-Chemistry-File-SMARTS/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SMARTS chemical substructure pattern linear notation parser +WWW= https://metacpan.org/release/Chemistry-File-SMARTS BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Ring>=0:science/p5-Chemistry-Ring \ diff --git a/science/p5-Chemistry-File-SMILES/Makefile b/science/p5-Chemistry-File-SMILES/Makefile index e9e5d7e94647..873128622b29 100644 --- a/science/p5-Chemistry-File-SMILES/Makefile +++ b/science/p5-Chemistry-File-SMILES/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= SMILES linear notation parser/writer +WWW= https://metacpan.org/release/Chemistry-File-SMILES BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Bond-Find>=0:science/p5-Chemistry-Bond-Find \ diff --git a/science/p5-Chemistry-File-VRML/Makefile b/science/p5-Chemistry-File-VRML/Makefile index 8fc1a7515500..54d80427602a 100644 --- a/science/p5-Chemistry-File-VRML/Makefile +++ b/science/p5-Chemistry-File-VRML/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Generate VRML models for molecules +WWW= https://metacpan.org/release/Chemistry-File-VRML BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol RUN_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol diff --git a/science/p5-Chemistry-File-XYZ/Makefile b/science/p5-Chemistry-File-XYZ/Makefile index cd9d941e46dc..a00f8faab31b 100644 --- a/science/p5-Chemistry-File-XYZ/Makefile +++ b/science/p5-Chemistry-File-XYZ/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= XYZ molecule format reader/writer +WWW= https://metacpan.org/release/Chemistry-File-XYZ BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol RUN_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol diff --git a/science/p5-Chemistry-FormulaPattern/Makefile b/science/p5-Chemistry-FormulaPattern/Makefile index 943b87918e6d..6eaafc7aa6cc 100644 --- a/science/p5-Chemistry-FormulaPattern/Makefile +++ b/science/p5-Chemistry-FormulaPattern/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Match molecule by formula +WWW= https://metacpan.org/release/Chemistry-FormulaPattern BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Pattern>=0:science/p5-Chemistry-Pattern diff --git a/science/p5-Chemistry-InternalCoords/Makefile b/science/p5-Chemistry-InternalCoords/Makefile index 782709a76968..4fdf819a3c70 100644 --- a/science/p5-Chemistry-InternalCoords/Makefile +++ b/science/p5-Chemistry-InternalCoords/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent the position of an atom using internal coordinates +WWW= https://metacpan.org/release/Chemistry-InternalCoords BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-Bond-Find>=0:science/p5-Chemistry-Bond-Find \ diff --git a/science/p5-Chemistry-Isotope/Makefile b/science/p5-Chemistry-Isotope/Makefile index fbc338edf82d..140520c2e268 100644 --- a/science/p5-Chemistry-Isotope/Makefile +++ b/science/p5-Chemistry-Isotope/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Table of the isotopes exact mass data +WWW= https://metacpan.org/release/Chemistry-Isotope USES= perl5 USE_PERL5= configure diff --git a/science/p5-Chemistry-MacroMol/Makefile b/science/p5-Chemistry-MacroMol/Makefile index 9823e36e4a79..8a196dd95948 100644 --- a/science/p5-Chemistry-MacroMol/Makefile +++ b/science/p5-Chemistry-MacroMol/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl toolkit to describe macromolecules +WWW= https://metacpan.org/release/Chemistry-MacroMol BUILD_DEPENDS= ${RUN_DEPENDS} RUN_DEPENDS= p5-Chemistry-Mol>=0.37:science/p5-Chemistry-Mol diff --git a/science/p5-Chemistry-MidasPattern/Makefile b/science/p5-Chemistry-MidasPattern/Makefile index 16a82d62328b..d8a2345deb09 100644 --- a/science/p5-Chemistry-MidasPattern/Makefile +++ b/science/p5-Chemistry-MidasPattern/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Select atoms in macromolecules +WWW= https://metacpan.org/release/Chemistry-MidasPattern BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-File-PDB>=0:science/p5-Chemistry-File-PDB \ diff --git a/science/p5-Chemistry-Mok/Makefile b/science/p5-Chemistry-Mok/Makefile index b0e9917699da..6b5adb48765b 100644 --- a/science/p5-Chemistry-Mok/Makefile +++ b/science/p5-Chemistry-Mok/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Molecular awk interpreter +WWW= https://metacpan.org/release/Chemistry-Mok BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-File-SMILES>=0:science/p5-Chemistry-File-SMILES \ diff --git a/science/p5-Chemistry-Mol/Makefile b/science/p5-Chemistry-Mol/Makefile index 096fd30cfacb..4f4c2e70ec69 100644 --- a/science/p5-Chemistry-Mol/Makefile +++ b/science/p5-Chemistry-Mol/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl toolkit to describe molecules +WWW= https://metacpan.org/release/Chemistry-Mol LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Chemistry-Pattern/Makefile b/science/p5-Chemistry-Pattern/Makefile index 5fb0112ad1c9..23647b617323 100644 --- a/science/p5-Chemistry-Pattern/Makefile +++ b/science/p5-Chemistry-Pattern/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Chemical substructure pattern matching +WWW= https://metacpan.org/release/Chemistry-Pattern BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol RUN_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol diff --git a/science/p5-Chemistry-Reaction/Makefile b/science/p5-Chemistry-Reaction/Makefile index d5fcc4f1e580..15eb202ef4a0 100644 --- a/science/p5-Chemistry-Reaction/Makefile +++ b/science/p5-Chemistry-Reaction/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent a ring as a substructure of a molecule +WWW= https://metacpan.org/release/Chemistry-Reaction LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Chemistry-Ring/Makefile b/science/p5-Chemistry-Ring/Makefile index f53cb51a9e8c..6c0d2f19e886 100644 --- a/science/p5-Chemistry-Ring/Makefile +++ b/science/p5-Chemistry-Ring/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Represent a ring as a substructure of a molecule +WWW= https://metacpan.org/release/Chemistry-Ring BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Statistics-Regression>=0:math/p5-Statistics-Regression diff --git a/science/p5-Geo-BUFR/Makefile b/science/p5-Geo-BUFR/Makefile index 9cb303d0a31a..1471bfbd896f 100644 --- a/science/p5-Geo-BUFR/Makefile +++ b/science/p5-Geo-BUFR/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= sunpoet@FreeBSD.org COMMENT= Perl extension for handling of WMO BUFR files +WWW= https://metacpan.org/release/Geo-BUFR LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENCE diff --git a/science/p5-Geo-Coordinates-Converter-iArea/Makefile b/science/p5-Geo-Coordinates-Converter-iArea/Makefile index d36d07b3b72e..40d55e3af48e 100644 --- a/science/p5-Geo-Coordinates-Converter-iArea/Makefile +++ b/science/p5-Geo-Coordinates-Converter-iArea/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= sunpoet@FreeBSD.org COMMENT= Some utility functions around iArea +WWW= https://metacpan.org/release/Geo-Coordinates-Converter-iArea LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Geo-Coordinates-Converter/Makefile b/science/p5-Geo-Coordinates-Converter/Makefile index 8509e9e9e0fb..0dffc9117c18 100644 --- a/science/p5-Geo-Coordinates-Converter/Makefile +++ b/science/p5-Geo-Coordinates-Converter/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Simple converter of geo coordinates +WWW= https://metacpan.org/release/Geo-Coordinates-Converter LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Geo-WebService-Elevation-USGS/Makefile b/science/p5-Geo-WebService-Elevation-USGS/Makefile index feadd04716ed..1b79d35fee99 100644 --- a/science/p5-Geo-WebService-Elevation-USGS/Makefile +++ b/science/p5-Geo-WebService-Elevation-USGS/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl extension for elevation queries against USGS web services +WWW= https://metacpan.org/release/Geo-WebService-Elevation-USGS LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/p5-Mcstas-Tools/Makefile b/science/p5-Mcstas-Tools/Makefile index ffae442e287d..79c44aba52bd 100644 --- a/science/p5-Mcstas-Tools/Makefile +++ b/science/p5-Mcstas-Tools/Makefile @@ -9,6 +9,7 @@ DISTFILES= mcstas-tools-perl-${PORTVERSION}-src.tar.gz \ MAINTAINER= erkn@fysik.dtu.dk COMMENT= Perl based tools for the McStas neutron ray tracing package +WWW= https://www.mcstas.org LICENSE= GPLv2 diff --git a/science/p5-PerlMol/Makefile b/science/p5-PerlMol/Makefile index c416ea22bced..41d57520f51f 100644 --- a/science/p5-PerlMol/Makefile +++ b/science/p5-PerlMol/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= swills@FreeBSD.org COMMENT= Perl modules for molecular chemistry +WWW= https://metacpan.org/release/PerlMol BUILD_DEPENDS= p5-Chemistry-Mol>=0:science/p5-Chemistry-Mol \ p5-Chemistry-MacroMol>=0:science/p5-Chemistry-MacroMol \ diff --git a/science/p5-Physics-Unit/Makefile b/science/p5-Physics-Unit/Makefile index 1384119e73b3..39e8efc4cfc3 100644 --- a/science/p5-Physics-Unit/Makefile +++ b/science/p5-Physics-Unit/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Manipulate Physics units and dimensions +WWW= https://metacpan.org/release/Physics-Unit LICENSE= ART10 GPLv1+ LICENSE_COMB= dual diff --git a/science/packmol/Makefile b/science/packmol/Makefile index 7c6012a5a905..9bc1a8ae9d98 100644 --- a/science/packmol/Makefile +++ b/science/packmol/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= jwb@FreeBSD.org COMMENT= Pack molecules in defined regions of space +WWW= http://m3g.iqm.unicamp.br/packmol/home.shtml LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/pagmo2/Makefile b/science/pagmo2/Makefile index 79dc7383d153..84d5fd616a14 100644 --- a/science/pagmo2/Makefile +++ b/science/pagmo2/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Platform to perform parallel computations of optimization tasks +WWW= https://esa.github.io/pagmo2/ LICENSE= GPLv3 LGPL3 LICENSE_COMB= dual diff --git a/science/paje/Makefile b/science/paje/Makefile index 708385df71ea..c1456b7dd902 100644 --- a/science/paje/Makefile +++ b/science/paje/Makefile @@ -8,6 +8,7 @@ EXTRACT_SUFX= .tar.gz.gz MAINTAINER= ports@FreeBSD.org COMMENT= Generic visualization tool for GNUstep (Gantt chart and more) +WWW= http://www-id.imag.fr/Logiciels/paje/ LICENSE= LGPL21 diff --git a/science/paraview/Makefile b/science/paraview/Makefile index d47cf0853fa4..b6e3f60930a5 100644 --- a/science/paraview/Makefile +++ b/science/paraview/Makefile @@ -7,6 +7,7 @@ DISTNAME= ParaView-v${PORTVERSION} MAINTAINER= thierry@FreeBSD.org COMMENT= Powerful scientific data visualization application +WWW= https://www.paraview.org/ LICENSE= ParaView_License_1.2 LICENSE_NAME= ParaView_License diff --git a/science/pastix/Makefile b/science/pastix/Makefile index a9578c0b0ee9..d7ed0758bb18 100644 --- a/science/pastix/Makefile +++ b/science/pastix/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= thierry@FreeBSD.org COMMENT= PaStiX: a sparse direct solver +WWW= https://solverstack.gitlabpages.inria.fr/pastix/ LICENSE= LGPL3 diff --git a/science/pcmsolver/Makefile b/science/pcmsolver/Makefile index 292794fe031f..88bd4167f924 100644 --- a/science/pcmsolver/Makefile +++ b/science/pcmsolver/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= API for the Polarizable Continuum Model +WWW= https://github.com/PCMSolver/pcmsolver LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/phonopy/Makefile b/science/phonopy/Makefile index cbede0a1cc1c..3a4fd0595a63 100644 --- a/science/phonopy/Makefile +++ b/science/phonopy/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science python MAINTAINER= yuri@FreeBSD.org COMMENT= Package for phonon calculations at harmonic and quasi-harmonic levels +WWW= https://phonopy.github.io/phonopy/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/plumed/Makefile b/science/plumed/Makefile index 4754ed64a730..42cf1557b32c 100644 --- a/science/plumed/Makefile +++ b/science/plumed/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://github.com/${PORTNAME}/${PORTNAME}2/releases/download/v${D MAINTAINER= yuri@FreeBSD.org COMMENT= PLUgin for MolEcular Dynamics +WWW= https://www.plumed.org/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/COPYING.LESSER diff --git a/science/pnetcdf/Makefile b/science/pnetcdf/Makefile index ea9c3b692735..b2040297690b 100644 --- a/science/pnetcdf/Makefile +++ b/science/pnetcdf/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://parallel-netcdf.github.io/Release/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Library providing high-performance I/O +WWW= https://parallel-netcdf.github.io/ USES= fortran gmake libtool pathfix perl5 USE_PERL5= build diff --git a/science/precice/Makefile b/science/precice/Makefile index 17863b10fd12..d5f8479997a6 100644 --- a/science/precice/Makefile +++ b/science/precice/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # physics MAINTAINER= yuri@FreeBSD.org COMMENT= Coupling library for partitioned multi-physics simulations +WWW= https://precice.org/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/pulseview/Makefile b/science/pulseview/Makefile index 8a7325360722..c636f77ba17d 100644 --- a/science/pulseview/Makefile +++ b/science/pulseview/Makefile @@ -10,6 +10,7 @@ PATCHFILES= ed643f0b4ac587204a5243451cda181ee1405d62.diff:-p1 MAINTAINER= ports@FreeBSD.org COMMENT= GUI client that supports various hardware logic analyzers +WWW= https://sigrok.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/py-DendroPy/Makefile b/science/py-DendroPy/Makefile index db40305dd3e6..0cef1c3ae718 100644 --- a/science/py-DendroPy/Makefile +++ b/science/py-DendroPy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= cs@FreeBSD.org COMMENT= Phylogenetic computing library +WWW= http://packages.python.org/DendroPy/ LICENSE= BSD3CLAUSE diff --git a/science/py-GPy/Makefile b/science/py-GPy/Makefile index 92b226407488..9428e273744d 100644 --- a/science/py-GPy/Makefile +++ b/science/py-GPy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Gaussian process toolbox +WWW= https://sheffieldml.github.io/GPy/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-GPyOpt/Makefile b/science/py-GPyOpt/Makefile index 02fbd34f2772..b838a6631b73 100644 --- a/science/py-GPyOpt/Makefile +++ b/science/py-GPyOpt/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Bayesian optimization toolbox based on GPy +WWW= https://sheffieldml.github.io/GPyOpt/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-MDAnalysis/Makefile b/science/py-MDAnalysis/Makefile index 37f782bfe445..085bbe144414 100644 --- a/science/py-MDAnalysis/Makefile +++ b/science/py-MDAnalysis/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python library to analyze molecular dynamics trajectories +WWW= https://www.mdanalysis.org LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-MDAnalysisTests/Makefile b/science/py-MDAnalysisTests/Makefile index 8fedcb2d3b9b..eff5d0b8adae 100644 --- a/science/py-MDAnalysisTests/Makefile +++ b/science/py-MDAnalysisTests/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Test code and the trajectory data for test cases of MDAnalysis +WWW= https://www.mdanalysis.org LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-OpenFermion-Dirac/Makefile b/science/py-OpenFermion-Dirac/Makefile index e01bddd3ab4f..d00ece8806d8 100644 --- a/science/py-OpenFermion-Dirac/Makefile +++ b/science/py-OpenFermion-Dirac/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Interface between OpenFermion and Dirac +WWW= https://github.com/bsenjean/Openfermion-Dirac LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-OpenFermion-PySCF/Makefile b/science/py-OpenFermion-PySCF/Makefile index d104c170835b..d177a12710a1 100644 --- a/science/py-OpenFermion-PySCF/Makefile +++ b/science/py-OpenFermion-PySCF/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Interface between OpenFermion and PySCF +WWW= https://github.com/quantumlib/OpenFermion-PySCF LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-OpenFermion/Makefile b/science/py-OpenFermion/Makefile index 0a72140a4437..e9189618eb8b 100644 --- a/science/py-OpenFermion/Makefile +++ b/science/py-OpenFermion/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Electronic structure package for quantum computers +WWW= https://github.com/quantumlib/OpenFermion LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-OpenMC/Makefile b/science/py-OpenMC/Makefile index 73c358800e96..a24b8fb8a670 100644 --- a/science/py-OpenMC/Makefile +++ b/science/py-OpenMC/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Monte Carlo neutron and photon transport simulation code (Python) +WWW= https://openmc.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-PubChemPy/Makefile b/science/py-PubChemPy/Makefile index a187183c085d..27702c3e7063 100644 --- a/science/py-PubChemPy/Makefile +++ b/science/py-PubChemPy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Simple Python wrapper around the PubChem PUG REST API +WWW= https://github.com/mcs07/PubChemPy LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-PyFR/Makefile b/science/py-PyFR/Makefile index 76b1b6fe25e5..6f584cb94d44 100644 --- a/science/py-PyFR/Makefile +++ b/science/py-PyFR/Makefile @@ -7,6 +7,7 @@ DISTNAME= pyfr-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Framework for solving advection-diffusion type problems +WWW= https://www.pyfr.org/ LICENSE= BSD3CLAUSE diff --git a/science/py-PyNE/Makefile b/science/py-PyNE/Makefile index abf63d4c46bb..986f8ae55461 100644 --- a/science/py-PyNE/Makefile +++ b/science/py-PyNE/Makefile @@ -18,6 +18,7 @@ EXTRACT_ONLY= ${DISTNAME}.tar.gz MAINTAINER= yuri@FreeBSD.org COMMENT= PyNE: The Nuclear Engineering Toolkit +WWW= https://pyne.io/ LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/license.txt diff --git a/science/py-SimpleSpectral/Makefile b/science/py-SimpleSpectral/Makefile index f17e6b1321f4..8dfe79a92fdb 100644 --- a/science/py-SimpleSpectral/Makefile +++ b/science/py-SimpleSpectral/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Simplified scipy.signal.spectral module with only pyFFTW support +WWW= https://github.com/xmikos/simplespectral LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-abipy/Makefile b/science/py-abipy/Makefile index da2079d29a6f..cae0849e3e16 100644 --- a/science/py-abipy/Makefile +++ b/science/py-abipy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library for analyzing the results produced by ABINIT +WWW= https://abinit.github.io/abipy/ LICENSE= GPLv2 diff --git a/science/py-access/Makefile b/science/py-access/Makefile index 3612671dae61..e801610fbd33 100644 --- a/science/py-access/Makefile +++ b/science/py-access/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Calculate spatial accessibility metrics +WWW= https://access.readthedocs.io/en/latest/ LICENSE= BSD3CLAUSE diff --git a/science/py-asap3/Makefile b/science/py-asap3/Makefile index 76a984a41374..e5ccc72ac189 100644 --- a/science/py-asap3/Makefile +++ b/science/py-asap3/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Classical potentials for MD with ASE +WWW= https://wiki.fysik.dtu.dk/asap LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-asdf-standard/Makefile b/science/py-asdf-standard/Makefile index 4f22e4620944..be8492da29c1 100644 --- a/science/py-asdf-standard/Makefile +++ b/science/py-asdf-standard/Makefile @@ -7,6 +7,7 @@ DISTNAME= asdf_standard-${PORTVERSION} MAINTAINER= sunpoet@FreeBSD.org COMMENT= ASDF Standard schemas +WWW= https://github.com/asdf-format/asdf-standard LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-asdf-transform-schemas/Makefile b/science/py-asdf-transform-schemas/Makefile index 7a9dc1467084..47d95cefb779 100644 --- a/science/py-asdf-transform-schemas/Makefile +++ b/science/py-asdf-transform-schemas/Makefile @@ -7,6 +7,7 @@ DISTNAME= asdf_transform_schemas-${PORTVERSION} MAINTAINER= sunpoet@FreeBSD.org COMMENT= ASDF schemas for transforms +WWW= https://github.com/asdf-format/asdf-transform-schemas LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-asdf/Makefile b/science/py-asdf/Makefile index 1f019aff334a..8a5a22916a28 100644 --- a/science/py-asdf/Makefile +++ b/science/py-asdf/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python tools to handle ASDF files +WWW= https://github.com/asdf-format/asdf LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-ase/Makefile b/science/py-ase/Makefile index fac8fbd498a5..cd8dcaecb8e1 100644 --- a/science/py-ase/Makefile +++ b/science/py-ase/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Atomic simulation environment +WWW= https://wiki.fysik.dtu.dk/ase/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/COPYING.LESSER diff --git a/science/py-avogadrolibs/Makefile b/science/py-avogadrolibs/Makefile index 81134304ec30..2c8b2f8e1750 100644 --- a/science/py-avogadrolibs/Makefile +++ b/science/py-avogadrolibs/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python bindings for Avogadro2 chemistry libraries +WWW= https://www.openchemistry.org/projects/avogadro2/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/py-cdo/Makefile b/science/py-cdo/Makefile index 6797753984a9..b91df6512752 100644 --- a/science/py-cdo/Makefile +++ b/science/py-cdo/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python binding to CDO (Climate Data Operators) +WWW= https://code.mpimet.mpg.de/projects/cdo/wiki/Cdo%7Brbpy%7D LICENSE= GPLv2 diff --git a/science/py-chainer-chemistry/Makefile b/science/py-chainer-chemistry/Makefile index 16ee77b73cbd..ebb0700fef06 100644 --- a/science/py-chainer-chemistry/Makefile +++ b/science/py-chainer-chemistry/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library for deep learning in biology and chemistry +WWW= https://github.com/pfnet-research/chainer-chemistry LICENSE= MIT diff --git a/science/py-chainer/Makefile b/science/py-chainer/Makefile index 942088a09460..ded2efb7bf8d 100644 --- a/science/py-chainer/Makefile +++ b/science/py-chainer/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Deep learning framework +WWW= https://chainer.org/ LICENSE= MIT diff --git a/science/py-chempy/Makefile b/science/py-chempy/Makefile index 553835f7fb1d..3974b69fbb29 100644 --- a/science/py-chempy/Makefile +++ b/science/py-chempy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Package useful for solving problems in chemistry +WWW= https://github.com/bjodah/chempy LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-aqt/Makefile b/science/py-cirq-aqt/Makefile index 02df7925f0ac..3f3ce3de53c4 100644 --- a/science/py-cirq-aqt/Makefile +++ b/science/py-cirq-aqt/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Cirq module to run on AQT quantum computers +WWW= https://github.com/quantumlib/cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-core/Makefile b/science/py-cirq-core/Makefile index c4afa0fd46f7..e52698b8228a 100644 --- a/science/py-cirq-core/Makefile +++ b/science/py-cirq-core/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Framework for Noisy Intermediate Scale Quantum (NISQ) circuits +WWW= https://github.com/quantumlib/cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-google/Makefile b/science/py-cirq-google/Makefile index 4cda760d948a..af997184f362 100644 --- a/science/py-cirq-google/Makefile +++ b/science/py-cirq-google/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Google Cirq adapter for IQM's quantum architectures +WWW= https://github.com/quantumlib/Cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-ionq/Makefile b/science/py-cirq-ionq/Makefile index 516940406e90..8864a124a222 100644 --- a/science/py-cirq-ionq/Makefile +++ b/science/py-cirq-ionq/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Cirq module to run on IonQ quantum computers +WWW= https://github.com/quantumlib/cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-pasqal/Makefile b/science/py-cirq-pasqal/Makefile index 4833b5e29342..b09182612d62 100644 --- a/science/py-cirq-pasqal/Makefile +++ b/science/py-cirq-pasqal/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Cirq module to run on pasqal quantum computers +WWW= https://github.com/quantumlib/cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-cirq-rigetti/Makefile b/science/py-cirq-rigetti/Makefile index 927fa203d95c..491cc02b4879 100644 --- a/science/py-cirq-rigetti/Makefile +++ b/science/py-cirq-rigetti/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Cirq module to run on Rigetti quantum computers +WWW= https://github.com/quantumlib/cirq LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-coards/Makefile b/science/py-coards/Makefile index c3396617b8b2..77d21edea3bc 100644 --- a/science/py-coards/Makefile +++ b/science/py-coards/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= COARDS compliant time parser +WWW= https://pypi.org/project/coards/ LICENSE= MIT diff --git a/science/py-dimod/Makefile b/science/py-dimod/Makefile index ef3c594540e9..92b0b44312d3 100644 --- a/science/py-dimod/Makefile +++ b/science/py-dimod/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Shared API for QUBO/Ising samplers +WWW= https://github.com/dwavesystems/dimod LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dipy/Makefile b/science/py-dipy/Makefile index 6e957e7fd494..dcbcd5e6a6a6 100644 --- a/science/py-dipy/Makefile +++ b/science/py-dipy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python toolbox for analysis of MR diffusion imaging +WWW= https://dipy.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dlib/Makefile b/science/py-dlib/Makefile index 7bc0159cd28a..edee30fff197 100644 --- a/science/py-dlib/Makefile +++ b/science/py-dlib/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= arrowd@FreeBSD.org COMMENT= Machine learning framework written in C++ (python bindings) +WWW= http://dlib.net LICENSE= BSL LICENSE_FILE= ${WRKSRC}/dlib/LICENSE.txt diff --git a/science/py-dwave-cloud-client/Makefile b/science/py-dwave-cloud-client/Makefile index 4fa07a673825..dc61ff1df932 100644 --- a/science/py-dwave-cloud-client/Makefile +++ b/science/py-dwave-cloud-client/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: REST interface to communicate with D-Wave Solver API servers +WWW= https://github.com/dwavesystems/dwave-cloud-client LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-greedy/Makefile b/science/py-dwave-greedy/Makefile index 931330ea1044..8bf855b54985 100644 --- a/science/py-dwave-greedy/Makefile +++ b/science/py-dwave-greedy/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Greedy binary quadratic model solvers +WWW= https://docs.ocean.dwavesys.com/projects/greedy/en/latest/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-hybrid/Makefile b/science/py-dwave-hybrid/Makefile index ec55f87fe9ab..9513c40092c3 100644 --- a/science/py-dwave-hybrid/Makefile +++ b/science/py-dwave-hybrid/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Hybrid asynchronous decomposition sampler prototype framework +WWW= https://docs.ocean.dwavesys.com/projects/hybrid/en/stable/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-inspector/Makefile b/science/py-dwave-inspector/Makefile index b5524a1f2ce4..fde949c69aef 100644 --- a/science/py-dwave-inspector/Makefile +++ b/science/py-dwave-inspector/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Problem Inspector +WWW= https://docs.ocean.dwavesys.com/projects/inspector/en/latest/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-neal/Makefile b/science/py-dwave-neal/Makefile index 8372956ee95f..7390ee04d2d0 100644 --- a/science/py-dwave-neal/Makefile +++ b/science/py-dwave-neal/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Simulated annealing sampler for general Ising model graphs +WWW= https://github.com/dwavesystems/dwave-neal LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-networkx/Makefile b/science/py-dwave-networkx/Makefile index 5ec75c428187..261d1a1aca0d 100644 --- a/science/py-dwave-networkx/Makefile +++ b/science/py-dwave-networkx/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME:S/-/_/}-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Extension of the NetworkX Python package for graphs +WWW= https://github.com/dwavesystems/dwave-networkx LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-dwave-ocean-sdk/Makefile b/science/py-dwave-ocean-sdk/Makefile index 6eca33cc29b4..03143b9c5656 100644 --- a/science/py-dwave-ocean-sdk/Makefile +++ b/science/py-dwave-ocean-sdk/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Meta-package for D-Wave's Ocean tools +WWW= https://docs.ocean.dwavesys.com/en/stable/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-preprocessing/Makefile b/science/py-dwave-preprocessing/Makefile index 076a8a528fb5..6c9da8420ea7 100644 --- a/science/py-dwave-preprocessing/Makefile +++ b/science/py-dwave-preprocessing/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Preprocessing tools to aid in solving binary quadratic models +WWW= https://github.com/dwavesystems/dwave-preprocessing LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-samplers/Makefile b/science/py-dwave-samplers/Makefile index 3cf98c394bd9..cbd9981d6913 100644 --- a/science/py-dwave-samplers/Makefile +++ b/science/py-dwave-samplers/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Classical algorithms for solving binary quadratic models +WWW= https://github.com/dwavesystems/dwave-samplers LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-system/Makefile b/science/py-dwave-system/Makefile index bbf53deeb7d3..b1b169f71089 100644 --- a/science/py-dwave-system/Makefile +++ b/science/py-dwave-system/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: API for incorporating the D-Wave system as a sampler +WWW= https://github.com/dwavesystems/dwave-system LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwave-tabu/Makefile b/science/py-dwave-tabu/Makefile index 210afeafe3b1..3f431fbb56f1 100644 --- a/science/py-dwave-tabu/Makefile +++ b/science/py-dwave-tabu/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Tabu solver for QUBO/Ising problems +WWW= https://github.com/dwavesystems/dwave-tabu LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-dwavebinarycsp/Makefile b/science/py-dwavebinarycsp/Makefile index 1f7d83b4779a..466570b90a92 100644 --- a/science/py-dwavebinarycsp/Makefile +++ b/science/py-dwavebinarycsp/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Map CSP with binary variables to binary quadratic models +WWW= https://docs.ocean.dwavesys.com/projects/binarycsp/en/latest/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-eccodes/Makefile b/science/py-eccodes/Makefile index dc3c4a4120e8..7a2f27b5329e 100644 --- a/science/py-eccodes/Makefile +++ b/science/py-eccodes/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python interface to the ecCodes BUFR and GRIB de/encoder +WWW= https://github.com/ecmwf/eccodes-python LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-esda/Makefile b/science/py-esda/Makefile index 169162e2a96e..a601599d0a0c 100644 --- a/science/py-esda/Makefile +++ b/science/py-esda/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Exploratory Spatial Data Analysis +WWW= https://pysal.org/esda/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-fresnel/Makefile b/science/py-fresnel/Makefile index de395cb38f30..f0b96a5eec06 100644 --- a/science/py-fresnel/Makefile +++ b/science/py-fresnel/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Publication quality path tracing in real time +WWW= https://github.com/glotzerlab/fresnel LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-geolinks/Makefile b/science/py-geolinks/Makefile index 97e9fc678ed6..7af650bb5d4c 100644 --- a/science/py-geolinks/Makefile +++ b/science/py-geolinks/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Utilities to deal with geospatial links +WWW= https://github.com/geopython/geolinks LICENSE= MIT diff --git a/science/py-geomet/Makefile b/science/py-geomet/Makefile index 875a8fb38bb9..dbfe57cbe47f 100644 --- a/science/py-geomet/Makefile +++ b/science/py-geomet/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= GeoJSON <-> WKT/WKB conversion utilities +WWW= https://github.com/geomet/geomet LICENSE= APACHE20 diff --git a/science/py-geometer/Makefile b/science/py-geometer/Makefile index 7a857ee074c4..28223f81337e 100644 --- a/science/py-geometer/Makefile +++ b/science/py-geometer/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python geometry package based on projective geometry and numpy +WWW= https://github.com/jan-mue/geometer LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-geometric/Makefile b/science/py-geometric/Makefile index 57ac6c3ce57e..9d24ba9ed37b 100644 --- a/science/py-geometric/Makefile +++ b/science/py-geometric/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Geometry optimization for quantum chemistry +WWW= https://github.com/leeping/geomeTRIC LICENSE= BSD3CLAUSE diff --git a/science/py-gpaw/Makefile b/science/py-gpaw/Makefile index 77235ee12e84..5a77104a693d 100644 --- a/science/py-gpaw/Makefile +++ b/science/py-gpaw/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DFT and beyond within the projector-augmented wave method in chemistry +WWW= https://wiki.fysik.dtu.dk/gpaw/ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-gsd/Makefile b/science/py-gsd/Makefile index a26a3c8b2b33..374e2682a78f 100644 --- a/science/py-gsd/Makefile +++ b/science/py-gsd/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= GSD (General Simulation Data) file format for Python +WWW= https://bitbucket.org/glotzer/gsd/wiki/Home LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-h5json/Makefile b/science/py-h5json/Makefile index 7dfa6995da70..e6625f7075da 100644 --- a/science/py-h5json/Makefile +++ b/science/py-h5json/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Tools and library for representing HDF5 in JSON +WWW= https://github.com/HDFGroup/hdf5-json LICENSE= BSD3CLAUSE diff --git a/science/py-h5py/Makefile b/science/py-h5py/Makefile index e32844aa52c8..d287ee00effc 100644 --- a/science/py-h5py/Makefile +++ b/science/py-h5py/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= General-purpose Python interface to the HDF5 library +WWW= https://www.h5py.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/licenses/license.txt diff --git a/science/py-hiphive/Makefile b/science/py-hiphive/Makefile index 7d2b2d1cb703..e5b4ba798741 100644 --- a/science/py-hiphive/Makefile +++ b/science/py-hiphive/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= High-order force constants for the masses +WWW= https://hiphive.materialsmodeling.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-hoomd-blue/Makefile b/science/py-hoomd-blue/Makefile index 6e17762b4830..e1f8c4032e6a 100644 --- a/science/py-hoomd-blue/Makefile +++ b/science/py-hoomd-blue/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Molecular dynamics and Monte Carlo soft matter simulation +WWW= https://glotzerlab.engin.umich.edu/hoomd-blue/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-inequality/Makefile b/science/py-inequality/Makefile index 460af4d0a3a6..a6d174beff58 100644 --- a/science/py-inequality/Makefile +++ b/science/py-inequality/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Spatial inequality analysis for PySAL +WWW= https://inequality.readthedocs.io/en/latest/ LICENSE= BSD3CLAUSE diff --git a/science/py-jupyter_jsmol/Makefile b/science/py-jupyter_jsmol/Makefile index 806fd28c03b2..e8813027319c 100644 --- a/science/py-jupyter_jsmol/Makefile +++ b/science/py-jupyter_jsmol/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= thierry@FreeBSD.org COMMENT= JSmol viewer widget for Jupyter Notebooks and JupyterLab +WWW= https://github.com/fekad/jupyter-jsmol LICENSE= BSD3CLAUSE diff --git a/science/py-kim-query/Makefile b/science/py-kim-query/Makefile index ab61808df701..086d173c1c61 100644 --- a/science/py-kim-query/Makefile +++ b/science/py-kim-query/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Helper routines for querying the OpenKIM repository +WWW= https://github.com/openkim/kim-query LICENSE= CDDL diff --git a/science/py-kinematics/Makefile b/science/py-kinematics/Makefile index 82d5c463dcb0..2bd3ebe19348 100644 --- a/science/py-kinematics/Makefile +++ b/science/py-kinematics/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python module to do attitude kinematics +WWW= https://github.com/skulumani/kinematics LICENSE= GPLv3 diff --git a/science/py-kliff/Makefile b/science/py-kliff/Makefile index f87da9e2f890..94a9f3249fa2 100644 --- a/science/py-kliff/Makefile +++ b/science/py-kliff/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= KIM-based Learning-Integrated Fitting Framework +WWW= https://github.com/mjwen/kliff LICENSE= CDDL diff --git a/science/py-kpLib/Makefile b/science/py-kpLib/Makefile index f66f698ca065..e48478a23a86 100644 --- a/science/py-kpLib/Makefile +++ b/science/py-kpLib/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library for finding optimal Generalized Monkhorst-Pack k-points grid +WWW= https://gitlab.com/muellergroup/kplib LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-liac-arff/Makefile b/science/py-liac-arff/Makefile index 72c1807fc2ff..a7adfb0fa5ab 100644 --- a/science/py-liac-arff/Makefile +++ b/science/py-liac-arff/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Read and write ARFF files in Python +WWW= https://github.com/renatopp/liac-arff LICENSE= MIT diff --git a/science/py-libgetar/Makefile b/science/py-libgetar/Makefile index aef8a63fffd9..90341e111091 100644 --- a/science/py-libgetar/Makefile +++ b/science/py-libgetar/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library to read and write GEneric Trajectory ARchives +WWW= https://github.com/glotzerlab/libgetar LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-libpysal/Makefile b/science/py-libpysal/Makefile index 084db98ebb90..43711f064c94 100644 --- a/science/py-libpysal/Makefile +++ b/science/py-libpysal/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Core components of PySAL A library of spatial analysis functions +WWW= https://pysal.org/libpysal/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-lifelines/Makefile b/science/py-lifelines/Makefile index f257215549e2..82a887fcdaef 100644 --- a/science/py-lifelines/Makefile +++ b/science/py-lifelines/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= rm@FreeBSD.org COMMENT= Survival analysis in Python +WWW= https://github.com/CamDavidsonPilon/lifelines/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-mdp/Makefile b/science/py-mdp/Makefile index c1ddaad21c7e..63746407ca40 100644 --- a/science/py-mdp/Makefile +++ b/science/py-mdp/Makefile @@ -8,6 +8,7 @@ DISTNAME= ${PORTNAME:tu}-${PORTVERSION} MAINTAINER= bofh@FreeBSD.org COMMENT= Modular toolkit for Data Processing +WWW= http://mdp-toolkit.sourceforge.net/ LICENSE= BSD3CLAUSE diff --git a/science/py-mmtf-python/Makefile b/science/py-mmtf-python/Makefile index 9645f71204ee..a88b8fe23301 100644 --- a/science/py-mmtf-python/Makefile +++ b/science/py-mmtf-python/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= MMTF (Macromolecular Transmission Format) Python API +WWW= https://github.com/rcsb/mmtf-python LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-molmod/Makefile b/science/py-molmod/Makefile index c7cb04a4a566..11d0952b4947 100644 --- a/science/py-molmod/Makefile +++ b/science/py-molmod/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Collection of molecular modelling tools for python +WWW= https://github.com/molmod/molmod LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-moltemplate/Makefile b/science/py-moltemplate/Makefile index 1b78780dfdef..e8cacecfba93 100644 --- a/science/py-moltemplate/Makefile +++ b/science/py-moltemplate/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Tool to prepare simulations of molecules, complex molecular assemblies +WWW= https://www.moltemplate.org/ LICENSE= MIT diff --git a/science/py-netCDF4/Makefile b/science/py-netCDF4/Makefile index 72a7b5eb3547..86952787d8a9 100644 --- a/science/py-netCDF4/Makefile +++ b/science/py-netCDF4/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= bofh@FreeBSD.org COMMENT= Python Interface to the NetCDF Library (versions 3 and 4) +WWW= https://unidata.github.io/netcdf4-python/ LICENSE= MIT diff --git a/science/py-netcdf-flattener/Makefile b/science/py-netcdf-flattener/Makefile index aa9fa07c8167..20f459f65601 100644 --- a/science/py-netcdf-flattener/Makefile +++ b/science/py-netcdf-flattener/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Flatten NetCDF files while preserving references +WWW= https://gitlab.eumetsat.int/open-source/netcdf-flattener LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-nibabel/Makefile b/science/py-nibabel/Makefile index 8bcbcdc757dc..c2b7752deeda 100644 --- a/science/py-nibabel/Makefile +++ b/science/py-nibabel/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Read/write some common neuroimaging file formats +WWW= https://nipy.org/nibabel/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/py-nilearn/Makefile b/science/py-nilearn/Makefile index 5810742ba326..fe6d35fdc3c7 100644 --- a/science/py-nilearn/Makefile +++ b/science/py-nilearn/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Statistical learning for neuroimaging in Python +WWW= https://nilearn.github.io/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-obspy/Makefile b/science/py-obspy/Makefile index 7bfaf3f7a589..6e4608fe2fd0 100644 --- a/science/py-obspy/Makefile +++ b/science/py-obspy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= wen@FreeBSD.org COMMENT= Python framework for seismological observatories +WWW= https://www.obspy.org/ LICENSE= LGPL3 diff --git a/science/py-oddt/Makefile b/science/py-oddt/Makefile index 2cda6e2cb6c6..590fda7e9a44 100644 --- a/science/py-oddt/Makefile +++ b/science/py-oddt/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Open Drug Discovery Toolkit +WWW= https://github.com/oddt/oddt LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-openpiv/Makefile b/science/py-openpiv/Makefile index 2fef96df33fe..7f3d34a64466 100644 --- a/science/py-openpiv/Makefile +++ b/science/py-openpiv/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= makc@FreeBSD.org COMMENT= Python module for Particle Image Velocimetry +WWW= http://www.openpiv.net/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-paida/Makefile b/science/py-paida/Makefile index 0ce44c7d18c4..6f3abf633d4f 100644 --- a/science/py-paida/Makefile +++ b/science/py-paida/Makefile @@ -10,6 +10,7 @@ BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}tkinter>0:x11-toolkits/py-tkinter@${PY_FLA MAINTAINER= ports@FreeBSD.org COMMENT= Pure Python scientific analysis package +WWW= http://paida.sourceforge.net USES= dos2unix python:3.6+ USE_PYTHON= distutils autoplist diff --git a/science/py-paramz/Makefile b/science/py-paramz/Makefile index 3883ee9b9a72..41df9578acc0 100644 --- a/science/py-paramz/Makefile +++ b/science/py-paramz/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Parameterization framework +WWW= https://github.com/sods/paramz LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-penaltymodel/Makefile b/science/py-penaltymodel/Makefile index b3b969eff9dd..93585899c799 100644 --- a/science/py-penaltymodel/Makefile +++ b/science/py-penaltymodel/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Utilities and interfaces for using penalty models +WWW= https://docs.ocean.dwavesys.com/projects/penaltymodel/en/latest/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-phono3py/Makefile b/science/py-phono3py/Makefile index 7b96ca4fb2a7..1e4bf7be1f20 100644 --- a/science/py-phono3py/Makefile +++ b/science/py-phono3py/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Software to calculate phonon-phonon interaction and related properties +WWW= https://atztogo.github.io/phono3py/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-phonopy/Makefile b/science/py-phonopy/Makefile index 21a9c11e798b..6a2fceeaa844 100644 --- a/science/py-phonopy/Makefile +++ b/science/py-phonopy/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Package for phonon calculations at harmonic and quasi-harmonic levels +WWW= https://phonopy.github.io/phonopy/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pupynere/Makefile b/science/py-pupynere/Makefile index 664948a503b7..1334080778d8 100644 --- a/science/py-pupynere/Makefile +++ b/science/py-pupynere/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= NetCDF file reader and writer +WWW= https://bitbucket.org/robertodealmeida/pupynere LICENSE= MIT diff --git a/science/py-py3Dmol/Makefile b/science/py-py3Dmol/Makefile index 75b09e606771..c786925be423 100644 --- a/science/py-py3Dmol/Makefile +++ b/science/py-py3Dmol/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= IPython interface for embedding 3Dmol.js views +WWW= https://3dmol.csb.pitt.edu/ LICENSE= WTFPL LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-pyaixi/Makefile b/science/py-pyaixi/Makefile index aa531113138c..a4f0893390a3 100644 --- a/science/py-pyaixi/Makefile +++ b/science/py-pyaixi/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Implementation of the MC-AIXI-CTW AI algorithm +WWW= https://github.com/sgkasselau/pyaixi LICENSE= CC-BY-SA-3.0 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-pyberny/Makefile b/science/py-pyberny/Makefile index c6a33367dd9c..269fc2c16839 100644 --- a/science/py-pyberny/Makefile +++ b/science/py-pyberny/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Optimizer of molecular geometries with respect to the total energy +WWW= https://github.com/jhrmnn/pyberny LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pycsw/Makefile b/science/py-pycsw/Makefile index 1c0ba72498ad..76b7ea06c55f 100644 --- a/science/py-pycsw/Makefile +++ b/science/py-pycsw/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= OGC CSW server implementation +WWW= https://pycsw.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-pydicom/Makefile b/science/py-pydicom/Makefile index ccaa04410237..3d59d66747d8 100644 --- a/science/py-pydicom/Makefile +++ b/science/py-pydicom/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= wen@FreeBSD.org COMMENT= Read, modify, and write DICOM files with Python code +WWW= https://github.com/pydicom/pydicom LICENSE= MIT diff --git a/science/py-pygeodesy/Makefile b/science/py-pygeodesy/Makefile index d6f72271503c..bfe11dd75bd2 100644 --- a/science/py-pygeodesy/Makefile +++ b/science/py-pygeodesy/Makefile @@ -8,6 +8,7 @@ DISTNAME= PyGeodesy-${PORTVERSION} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Pure Python geodesy tools +WWW= https://github.com/mrJean1/PyGeodesy LICENSE= MIT diff --git a/science/py-pygeometa/Makefile b/science/py-pygeometa/Makefile index e098e988b547..470bf1ce37ee 100644 --- a/science/py-pygeometa/Makefile +++ b/science/py-pygeometa/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Generate metadata for geospatial datasets +WWW= https://github.com/geopython/pygeometa LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.md diff --git a/science/py-pygmo2/Makefile b/science/py-pygmo2/Makefile index 79b556f98ec3..1768f06d6243 100644 --- a/science/py-pygmo2/Makefile +++ b/science/py-pygmo2/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python platform to perform parallel computations of optimisation tasks +WWW= https://esa.github.io/pygmo2/ LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pyked/Makefile b/science/py-pyked/Makefile index 0534b8dde910..f6b875b7c17e 100644 --- a/science/py-pyked/Makefile +++ b/science/py-pyked/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Package for manipulating Chemical Kinetics Experimental Data files +WWW= https://pr-omethe-us.github.io/PyKED/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pymatgen/Makefile b/science/py-pymatgen/Makefile index c811cc507813..5a12618d4cb0 100644 --- a/science/py-pymatgen/Makefile +++ b/science/py-pymatgen/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python Materials Genomics is a robust materials analysis code +WWW= https://pymatgen.org/ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.rst diff --git a/science/py-pymbd/Makefile b/science/py-pymbd/Makefile index 2a3986a4fd7d..aacf2e66973d 100644 --- a/science/py-pymbd/Makefile +++ b/science/py-pymbd/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Many-body dispersion library +WWW= https://github.com/libmbd/libmbd LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pymol/Makefile b/science/py-pymol/Makefile index 8550d013d755..0c1a7ad8a18f 100644 --- a/science/py-pymol/Makefile +++ b/science/py-pymol/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= OpenGL-based molecular visualization system +WWW= https://pymol.org/2/ LICENSE= PyMOL LICENSE_NAME= Open-Source PyMOL Copyright diff --git a/science/py-pyosf/Makefile b/science/py-pyosf/Makefile index b1f97ddddd15..4113358fbaa0 100644 --- a/science/py-pyosf/Makefile +++ b/science/py-pyosf/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python library for synching with OpenScienceFramework projects +WWW= https://github.com/psychopy/pyosf LICENSE= MIT diff --git a/science/py-pyprecice/Makefile b/science/py-pyprecice/Makefile index 8a405e1518ae..fe1729729a93 100644 --- a/science/py-pyprecice/Makefile +++ b/science/py-pyprecice/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Coupling library for partitioned multi-physics simulations +WWW= https://precice.org/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-pyqubo/Makefile b/science/py-pyqubo/Makefile index d3e9b27683a8..b01203473b6e 100644 --- a/science/py-pyqubo/Makefile +++ b/science/py-pyqubo/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= DWave: Python DSL for constructing QUBOs from mathematical expressions +WWW= https://pyqubo.readthedocs.io/en/latest/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pysal/Makefile b/science/py-pysal/Makefile index ac48d98c1300..a068d285d15e 100644 --- a/science/py-pysal/Makefile +++ b/science/py-pysal/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Cross-platform library of spatial analysis functions +WWW= https://pysal.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-pyscf/Makefile b/science/py-pyscf/Makefile index 0a8898515005..7c2c6fa26652 100644 --- a/science/py-pyscf/Makefile +++ b/science/py-pyscf/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python module for quantum chemistry +WWW= https://www.pymol.org/ LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-pyteomics/Makefile b/science/py-pyteomics/Makefile index 5e4421a2cf42..e9c09575801f 100644 --- a/science/py-pyteomics/Makefile +++ b/science/py-pyteomics/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Python modules for proteomics data analysis +WWW= https://pyteomics.readthedocs.io/ LICENSE= APACHE20 diff --git a/science/py-qcelemental/Makefile b/science/py-qcelemental/Makefile index b8f4970676d8..75bb1f95c366 100644 --- a/science/py-qcelemental/Makefile +++ b/science/py-qcelemental/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Essentials for quantum chemistry +WWW= https://github.com/MolSSI/QCElemental LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-qcengine/Makefile b/science/py-qcengine/Makefile index e7c8ae7a068a..ca8ce40492f2 100644 --- a/science/py-qcengine/Makefile +++ b/science/py-qcengine/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum chemistry program executor and IO standardizer (QCSchema) +WWW= https://github.com/MolSSI/QCEngine LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-qiskit-aer/Makefile b/science/py-qiskit-aer/Makefile index bdf6b96b378c..ec37a18f0f7e 100644 --- a/science/py-qiskit-aer/Makefile +++ b/science/py-qiskit-aer/Makefile @@ -9,6 +9,7 @@ PATCHFILES= 46d86944f349a177acb40fb8a3adc301c395fe60.patch:-p1 # https://github. MAINTAINER= yuri@FreeBSD.org COMMENT= Aer submodule of the Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-experiments/Makefile b/science/py-qiskit-experiments/Makefile index ee8a81524b8f..55304c6b2735 100644 --- a/science/py-qiskit-experiments/Makefile +++ b/science/py-qiskit-experiments/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Experiments submodule for Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-finance/Makefile b/science/py-qiskit-finance/Makefile index f804273f6495..a3762fd2ba6c 100644 --- a/science/py-qiskit-finance/Makefile +++ b/science/py-qiskit-finance/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum Finance module from the Qiskit quantum computing framework +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-ibm-experiment/Makefile b/science/py-qiskit-ibm-experiment/Makefile index 4faf0730b625..cff5ffa6ab6a 100644 --- a/science/py-qiskit-ibm-experiment/Makefile +++ b/science/py-qiskit-ibm-experiment/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= IBM Experiment submodule for Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-ibm-provider/Makefile b/science/py-qiskit-ibm-provider/Makefile index 9e8ba519d08c..fe2dbe6ca45b 100644 --- a/science/py-qiskit-ibm-provider/Makefile +++ b/science/py-qiskit-ibm-provider/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Qiskit Provider for accessing IBM quantum devices and simulators +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-ibmq-provider/Makefile b/science/py-qiskit-ibmq-provider/Makefile index 63cdbb562a03..ca12815e4467 100644 --- a/science/py-qiskit-ibmq-provider/Makefile +++ b/science/py-qiskit-ibmq-provider/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Qiskit Provider for accessing IBM quantum devices and simulators +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-nature/Makefile b/science/py-qiskit-nature/Makefile index baf158986b17..621a635ae68b 100644 --- a/science/py-qiskit-nature/Makefile +++ b/science/py-qiskit-nature/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Natural science submodule for Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-optimization/Makefile b/science/py-qiskit-optimization/Makefile index 65b6e31c29ed..49b6fe072fe7 100644 --- a/science/py-qiskit-optimization/Makefile +++ b/science/py-qiskit-optimization/Makefile @@ -8,6 +8,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Optimization submodule of the Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit-terra/Makefile b/science/py-qiskit-terra/Makefile index c5db39472918..22db242c7450 100644 --- a/science/py-qiskit-terra/Makefile +++ b/science/py-qiskit-terra/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Terra submodule of the Quiskit framework for quantum computing +WWW= https://qiskit.org/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-qiskit/Makefile b/science/py-qiskit/Makefile index 030cc90b5065..87d78192b70b 100644 --- a/science/py-qiskit/Makefile +++ b/science/py-qiskit/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Qiskit meta-package: SDK for working with quantum computers +WWW= https://qiskit.org/ LICENSE= BSD2CLAUSE diff --git a/science/py-qspin/Makefile b/science/py-qspin/Makefile index 93144a2da386..cbaec7b0a9e5 100644 --- a/science/py-qspin/Makefile +++ b/science/py-qspin/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Learn quantum spin and entanglement +WWW= https://bitbucket.org/donald_gavel/qspin LICENSE= MIT diff --git a/science/py-quantities/Makefile b/science/py-quantities/Makefile index 8ad52585c1ed..75612525792c 100644 --- a/science/py-quantities/Makefile +++ b/science/py-quantities/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Support for physical quantities with units, based on numpy +WWW= https://github.com/python-quantities/python-quantities LICENSE= BSD3CLAUSE diff --git a/science/py-rmf/Makefile b/science/py-rmf/Makefile index fb8a434c6adb..fdff955f07d8 100644 --- a/science/py-rmf/Makefile +++ b/science/py-rmf/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library to support reading and writing of Rich Molecular Format files +WWW= https://integrativemodeling.org/rmf/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/py-rmsd/Makefile b/science/py-rmsd/Makefile index 1f7b0e260c40..157a6b83205e 100644 --- a/science/py-rmsd/Makefile +++ b/science/py-rmsd/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Calculate root-mean-square deviation (RMSD) between coordinate sets +WWW= https://github.com/charnley/rmsd LICENSE= BSD2CLAUSE diff --git a/science/py-ruffus/Makefile b/science/py-ruffus/Makefile index 4fc9424f92d2..cbc22b968c4e 100644 --- a/science/py-ruffus/Makefile +++ b/science/py-ruffus/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= kai@FreeBSD.org COMMENT= Lightweight library for computational pipelines +WWW= http://www.ruffus.org.uk LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.TXT diff --git a/science/py-scikit-fuzzy/Makefile b/science/py-scikit-fuzzy/Makefile index e4837b3db288..c8ca49ccf033 100644 --- a/science/py-scikit-fuzzy/Makefile +++ b/science/py-scikit-fuzzy/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Fuzzy logic toolkit for SciPy +WWW= https://github.com/scikit-fuzzy/scikit-fuzzy/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-scikit-learn/Makefile b/science/py-scikit-learn/Makefile index 8bd5485c42cc..8e3940cce6d0 100644 --- a/science/py-scikit-learn/Makefile +++ b/science/py-scikit-learn/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= wen@FreeBSD.org COMMENT= Machine learning algorithms for python +WWW= https://scikit-learn.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/py-scikit-optimize/Makefile b/science/py-scikit-optimize/Makefile index 76ad9f759479..729ddadaaac6 100644 --- a/science/py-scikit-optimize/Makefile +++ b/science/py-scikit-optimize/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Sequential model-based optimization toolbox +WWW= https://github.com/scikit-optimize/scikit-optimize LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-scikit-sparse/Makefile b/science/py-scikit-sparse/Makefile index a2867c8b745c..895dc6f38078 100644 --- a/science/py-scikit-sparse/Makefile +++ b/science/py-scikit-sparse/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Sparse matrix package +WWW= https://github.com/scikit-sparse/scikit-sparse LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-scimath/Makefile b/science/py-scimath/Makefile index c13b250fe291..c51c92f14c27 100644 --- a/science/py-scimath/Makefile +++ b/science/py-scimath/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= wen@FreeBSD.org COMMENT= Scientific and Mathematical calculations +WWW= https://pypi.org/project/scimath/ LICENSE= BSD3CLAUSE LGPL3 LICENSE_COMB= dual diff --git a/science/py-scipy/Makefile b/science/py-scipy/Makefile index f21a66209735..9286290d2b57 100644 --- a/science/py-scipy/Makefile +++ b/science/py-scipy/Makefile @@ -11,6 +11,7 @@ EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} MAINTAINER= python@FreeBSD.org COMMENT= Scientific tools for Python +WWW= https://www.scipy.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-scoria/Makefile b/science/py-scoria/Makefile index 39ce09ed4e5d..04b47ecb1952 100644 --- a/science/py-scoria/Makefile +++ b/science/py-scoria/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Lightweight molecule manipulation codebase +WWW= https://git.durrantlab.pitt.edu/jdurrant/scoria LICENSE= APACHE20 diff --git a/science/py-segregation/Makefile b/science/py-segregation/Makefile index 2adcf6cfe2c8..617182d14848 100644 --- a/science/py-segregation/Makefile +++ b/science/py-segregation/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Analytics for spatial and non-spatial segregation in Python +WWW= https://pysal.org/segregation/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-segyio/Makefile b/science/py-segyio/Makefile index 2d6e76ed4a61..b1ac4f10aab1 100644 --- a/science/py-segyio/Makefile +++ b/science/py-segyio/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Python binding for segyio, the seismic data library +WWW= https://github.com/equinor/segyio LICENSE= LGPL3+ diff --git a/science/py-sklearn-pandas/Makefile b/science/py-sklearn-pandas/Makefile index 98409e225c1d..512ffb5f65c2 100644 --- a/science/py-sklearn-pandas/Makefile +++ b/science/py-sklearn-pandas/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Pandas integration with sklearn +WWW= https://github.com/scikit-learn-contrib/sklearn-pandas LICENSE= BSD2CLAUSE ZLIB LICENSE_COMB= multi diff --git a/science/py-skrebate/Makefile b/science/py-skrebate/Makefile index 807ede87d842..408d28c8529a 100644 --- a/science/py-skrebate/Makefile +++ b/science/py-skrebate/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Relief-based feature selection algorithms +WWW= https://github.com/EpistasisLab/scikit-rebate LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-spaghetti/Makefile b/science/py-spaghetti/Makefile index dbcfe64f1d21..aa1c8cfc1f7c 100644 --- a/science/py-spaghetti/Makefile +++ b/science/py-spaghetti/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Analysis of Network-constrained Spatial Data +WWW= https://pysal.org/spaghetti/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/py-spglib/Makefile b/science/py-spglib/Makefile index 01ecbfeafc4f..1df3e0c64f6b 100644 --- a/science/py-spglib/Makefile +++ b/science/py-spglib/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library for finding and handling crystal symmetries (python binding) +WWW= https://atztogo.github.io/spglib/ LICENSE= BSD3CLAUSE diff --git a/science/py-tensorflow/Makefile b/science/py-tensorflow/Makefile index ccfdfbc6e3e7..8ebaa584bb03 100644 --- a/science/py-tensorflow/Makefile +++ b/science/py-tensorflow/Makefile @@ -9,6 +9,7 @@ EXTRACT_ONLY= ${DISTNAME}.tar.gz MAINTAINER= amzo1337@gmail.com COMMENT= Computation using data flow graphs for scalable machine learning +WWW= https://www.tensorflow.org LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-thewalrus/Makefile b/science/py-thewalrus/Makefile index d09576419c50..9f9227e19d0e 100644 --- a/science/py-thewalrus/Makefile +++ b/science/py-thewalrus/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Open source library for hafnian calculation +WWW= https://github.com/XanaduAI/thewalrus LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-tobler/Makefile b/science/py-tobler/Makefile index fe5972253bd2..902efe9cbbd0 100644 --- a/science/py-tobler/Makefile +++ b/science/py-tobler/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= sunpoet@FreeBSD.org COMMENT= Areal Interpolation +WWW= https://pysal.org/tobler/ LICENSE= BSD3CLAUSE diff --git a/science/py-trainstation/Makefile b/science/py-trainstation/Makefile index 730fec45d628..dee1d0345f7f 100644 --- a/science/py-trainstation/Makefile +++ b/science/py-trainstation/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Convenient training of linear models +WWW= https://trainstation.materialsmodeling.org/ LICENSE= GPLv3+ LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-tweedledum/Makefile b/science/py-tweedledum/Makefile index 1111e7dbb82d..cec297c366f4 100644 --- a/science/py-tweedledum/Makefile +++ b/science/py-tweedledum/Makefile @@ -6,6 +6,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library for analysis, compilation, synthesis of quantum circuits +WWW= https://github.com/boschmitt/tweedledum LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/py-veusz/Makefile b/science/py-veusz/Makefile index 038ca736b658..54276771619d 100644 --- a/science/py-veusz/Makefile +++ b/science/py-veusz/Makefile @@ -7,6 +7,7 @@ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Scientific plotting package +WWW= https://veusz.github.io/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/pybrain/Makefile b/science/pybrain/Makefile index 9427fad0484a..37e70249d79d 100644 --- a/science/pybrain/Makefile +++ b/science/pybrain/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science python MAINTAINER= wen@FreeBSD.org COMMENT= Swiss Army knife for neural networking +WWW= http://pybrain.org/ LICENSE= BSD3CLAUSE diff --git a/science/pynn/Makefile b/science/pynn/Makefile index 4a7146a81167..fa0f12e910f3 100644 --- a/science/pynn/Makefile +++ b/science/pynn/Makefile @@ -7,6 +7,7 @@ DISTNAME= PyNN-${PORTVERSION} MAINTAINER= wen@FreeBSD.org COMMENT= Simulator-independent language for building neuronal network models +WWW= https://neuralensemble.org/PyNN LICENSE= CeCILL LICENSE_NAME= CeCILL Free Software License Version 2.0 diff --git a/science/q/Makefile b/science/q/Makefile index 587e3c03ed98..f7c4314c0965 100644 --- a/science/q/Makefile +++ b/science/q/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Molecular Dynamics (MD) tools +WWW= https://github.com/qusers/Q6 LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/qbox/Makefile b/science/qbox/Makefile index 64881dc478c7..81a2f62dcc76 100644 --- a/science/qbox/Makefile +++ b/science/qbox/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= First-principles molecular dynamics code +WWW= http://qboxcode.org/ LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/../COPYING diff --git a/science/qcl/Makefile b/science/qcl/Makefile index 698623882f8d..f96761154d0d 100644 --- a/science/qcl/Makefile +++ b/science/qcl/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://tph.tuwien.ac.at/~oemer/tgz/ MAINTAINER= ports@FreeBSD.org COMMENT= Quantum computer simulator +WWW= http://tph.tuwien.ac.at/~oemer/qcl.html LICENSE= GPLv2+ diff --git a/science/qiskit-aer/Makefile b/science/qiskit-aer/Makefile index 2c0ff4db159b..54fadd187487 100644 --- a/science/qiskit-aer/Makefile +++ b/science/qiskit-aer/Makefile @@ -7,6 +7,7 @@ PATCHFILES= 46d86944f349a177acb40fb8a3adc301c395fe60.patch:-p1 # https://github. MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum circuits simulator submodule of the Qiskit framework +WWW= https://qiskit.org/aer/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/qmcpack/Makefile b/science/qmcpack/Makefile index 3009c971c030..70c0ad8a3aec 100644 --- a/science/qmcpack/Makefile +++ b/science/qmcpack/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Many-body ab initio Quantum Monte Carlo code for quantum chemistry +WWW= https://www.qmcpack.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/quantum-espresso-pseudopotentials/Makefile b/science/quantum-espresso-pseudopotentials/Makefile index 2d8cee7855c3..c2fc2a2ea5d3 100644 --- a/science/quantum-espresso-pseudopotentials/Makefile +++ b/science/quantum-espresso-pseudopotentials/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Pseudopotentials for use with Quantum Espresso +WWW= https://www.quantum-espresso.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/License diff --git a/science/quantum-espresso/Makefile b/science/quantum-espresso/Makefile index 5bf524eaeac3..bc2fd4cc23ad 100644 --- a/science/quantum-espresso/Makefile +++ b/science/quantum-espresso/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Package for research in electronic structure, simulation, optimization +WWW= https://www.quantum-espresso.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/License diff --git a/science/quantum-jet/Makefile b/science/quantum-jet/Makefile index 7c94e153935e..20629fc20aec 100644 --- a/science/quantum-jet/Makefile +++ b/science/quantum-jet/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # quantum-computing MAINTAINER= yuri@FreeBSD.org COMMENT= Cross-platform header-only library for simulating quantum circuits +WWW= https://github.com/XanaduAI/jet LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/qwalk/Makefile b/science/qwalk/Makefile index c4b1e8b34ffe..ad007aa06c88 100644 --- a/science/qwalk/Makefile +++ b/science/qwalk/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Quantum Monte Carlo package for quantum chemistry computations +WWW= https://qwalk.github.io/mainline/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/../COPYING diff --git a/science/rdkit/Makefile b/science/rdkit/Makefile index 9a9b15981722..4092db66e186 100644 --- a/science/rdkit/Makefile +++ b/science/rdkit/Makefile @@ -9,6 +9,7 @@ DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Collection of cheminformatics and machine-learning software +WWW= https://www.rdkit.org/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/license.txt diff --git a/science/rmf/Makefile b/science/rmf/Makefile index 9322093c26ff..199bf5bb3dda 100644 --- a/science/rmf/Makefile +++ b/science/rmf/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science graphics MAINTAINER= yuri@FreeBSD.org COMMENT= Library to support reading and writing of Rich Molecular Format files +WWW= https://integrativemodeling.org/rmf/ LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/rubygem-ai4r/Makefile b/science/rubygem-ai4r/Makefile index 3053e1477787..569c5070c92d 100644 --- a/science/rubygem-ai4r/Makefile +++ b/science/rubygem-ai4r/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= ruby@FreeBSD.org COMMENT= Various Ruby artificial intelligence algorithm implementations +WWW= http://www.ai4r.org/ LICENSE= MPL11 diff --git a/science/rubygem-cdo/Makefile b/science/rubygem-cdo/Makefile index 81a15d63bbb1..c1316defb763 100644 --- a/science/rubygem-cdo/Makefile +++ b/science/rubygem-cdo/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= sunpoet@FreeBSD.org COMMENT= Ruby binding to CDO (Climate Data Operators) +WWW= https://code.mpimet.mpg.de/projects/cdo/wiki/Cdo%7Brbpy%7D LICENSE= BSD3CLAUSE diff --git a/science/rubygem-rgeo-geojson/Makefile b/science/rubygem-rgeo-geojson/Makefile index 42447f43bb86..9e27c91b9e71 100644 --- a/science/rubygem-rgeo-geojson/Makefile +++ b/science/rubygem-rgeo-geojson/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= sunpoet@FreeBSD.org COMMENT= GeoJSON formatting and parsing in Ruby +WWW= https://github.com/rgeo/rgeo-geojson LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/rubygem-rgeo-proj4/Makefile b/science/rubygem-rgeo-proj4/Makefile index 80938a1e8e45..23969d71cec7 100644 --- a/science/rubygem-rgeo-proj4/Makefile +++ b/science/rubygem-rgeo-proj4/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= sunpoet@FreeBSD.org COMMENT= Proj.4 extension for RGeo +WWW= https://github.com/rgeo/rgeo-proj4 LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/rubygem-rgeo-shapefile/Makefile b/science/rubygem-rgeo-shapefile/Makefile index 3b1d64a6e425..5f478dad88e5 100644 --- a/science/rubygem-rgeo-shapefile/Makefile +++ b/science/rubygem-rgeo-shapefile/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= sunpoet@FreeBSD.org COMMENT= RGeo module for reading the ESRI shapefile format +WWW= https://github.com/rgeo/rgeo-shapefile LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/rubygem-rgeo/Makefile b/science/rubygem-rgeo/Makefile index 566290f7880a..e1fa4eacff49 100644 --- a/science/rubygem-rgeo/Makefile +++ b/science/rubygem-rgeo/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= sunpoet@FreeBSD.org COMMENT= Geospatial data library for Ruby (RGeo) +WWW= https://github.com/rgeo/rgeo LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/rubygem-ruby-dcl/Makefile b/science/rubygem-ruby-dcl/Makefile index 3dd51480c965..1cd46158a069 100644 --- a/science/rubygem-ruby-dcl/Makefile +++ b/science/rubygem-ruby-dcl/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= murashin@gfd-dennou.org COMMENT= Ruby interface to the scientific graphic library DCL +WWW= http://ruby.gfd-dennou.org/products/ruby-dcl/ LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/rubygem-ruby-netcdf/Makefile b/science/rubygem-ruby-netcdf/Makefile index f43fed0667c7..98dda7aae1eb 100644 --- a/science/rubygem-ruby-netcdf/Makefile +++ b/science/rubygem-ruby-netcdf/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= RG MAINTAINER= ruby@FreeBSD.org COMMENT= Ruby interface to the NetCDF scientific IO library +WWW= https://www.gfd-dennou.org/arch/ruby/products/ruby-netcdf/ LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/scidavis/Makefile b/science/scidavis/Makefile index df3f12156151..7696ac3f56b8 100644 --- a/science/scidavis/Makefile +++ b/science/scidavis/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= makc@FreeBSD.org COMMENT= Scientific data analysis and visualization +WWW= http://scidavis.sourceforge.net LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/segyio/Makefile b/science/segyio/Makefile index b6fe6d3e9e93..9e28c6fbbacc 100644 --- a/science/segyio/Makefile +++ b/science/segyio/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Library to interact with SEG-Y & Seismic Unix formatted seismic data +WWW= https://github.com/equinor/segyio LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/License.md diff --git a/science/serac/Makefile b/science/serac/Makefile index aa6870216062..c9d641545e3b 100644 --- a/science/serac/Makefile +++ b/science/serac/Makefile @@ -4,6 +4,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= High order nonlinear thermomechanical simulation code +WWW= https://github.com/LLNL/serac LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/shelxle/Makefile b/science/shelxle/Makefile index 7274a73bcd94..d156d2c4f8bf 100644 --- a/science/shelxle/Makefile +++ b/science/shelxle/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= SF/${PORTNAME}/code/ MAINTAINER= yuri@FreeBSD.org COMMENT= Graphical user interface for small-molecule structure refinement +WWW= https://www.shelxle.org/shelx/eingabe.php LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/siconos/Makefile b/science/siconos/Makefile index 6fa96cab3f28..53019d3b30f3 100644 --- a/science/siconos/Makefile +++ b/science/siconos/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Simulation framework for nonsmooth dynamical systems +WWW= https://nonsmooth.gricad-pages.univ-grenoble-alpes.fr/siconos/index.html LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/siesta/Makefile b/science/siesta/Makefile index ef3ccaf54120..ff49fc53f493 100644 --- a/science/siesta/Makefile +++ b/science/siesta/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://gitlab.com/siesta-project/${PORTNAME}/-/releases/v${DISTVE MAINTAINER= yuri@FreeBSD.org COMMENT= Program to perform efficient electronic structure calculations +WWW= https://icmab.es/siesta LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/../COPYING @@ -16,7 +17,6 @@ BROKEN_FreeBSD_13_powerpc= Lack of IEEE754 support in gcc causes "Cannot find an BROKEN_FreeBSD_13_powerpc64= Lack of IEEE754 support in gcc causes "Cannot find an intrinsic module named 'ieee_arithmetic'", see bug#255890 BROKEN_FreeBSD_13_powerpc64le= Lack of IEEE754 support in gcc causes "Cannot find an intrinsic module named 'ieee_arithmetic'", see bug#255890 - LIB_DEPENDS= libblas.so:math/blas \ liblapack.so:math/lapack diff --git a/science/sigrok-cli/Makefile b/science/sigrok-cli/Makefile index a3b22f9687e4..6ab4ce3f2de0 100644 --- a/science/sigrok-cli/Makefile +++ b/science/sigrok-cli/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://sigrok.org/download/source/sigrok-cli/ MAINTAINER= bofh@FreeBSD.org COMMENT= Framework for hardware logic analyzers, CLI client +WWW= https://sigrok.org/ LICENSE= GPLv3 diff --git a/science/sigrok-firmware-fx2lafw/Makefile b/science/sigrok-firmware-fx2lafw/Makefile index 1c108fc31dd0..5307060a03f6 100644 --- a/science/sigrok-firmware-fx2lafw/Makefile +++ b/science/sigrok-firmware-fx2lafw/Makefile @@ -8,6 +8,7 @@ DISTNAME= ${PKGNAMEPREFIX}${PORTNAME}${PKGNAMESUFFIX}-bin-${PORTVERSION} MAINTAINER= bofh@FreeBSD.org COMMENT= Cypress FX2 firmware for hardware logic analyzers +WWW= https://www.sigrok.org/wiki/Fx2lafw LICENSE= GPLv2 diff --git a/science/sigrok-firmware-utils/Makefile b/science/sigrok-firmware-utils/Makefile index 9a4f72892bd8..26b6dd95096c 100644 --- a/science/sigrok-firmware-utils/Makefile +++ b/science/sigrok-firmware-utils/Makefile @@ -9,6 +9,7 @@ DISTFILES= #none MAINTAINER= bofh@FreeBSD.org COMMENT= Sigrok firmware extraction utilities +WWW= https://www.sigrok.org/wiki/Firmware LICENSE= GPLv3+ diff --git a/science/sigrok-firmware/Makefile b/science/sigrok-firmware/Makefile index a0193b1126a5..6fc1cb8c7ffc 100644 --- a/science/sigrok-firmware/Makefile +++ b/science/sigrok-firmware/Makefile @@ -5,6 +5,7 @@ PKGNAMEPREFIX= sigrok- MAINTAINER= bofh@FreeBSD.org COMMENT= Sigrok firmware +WWW= https://www.sigrok.org/wiki/Firmware RUN_DEPENDS= parseelf.py:science/sigrok-firmware-utils \ ${LOCALBASE}/share/sigrok-firmware/fx2lafw-cypress-fx2.fw:science/sigrok-firmware-fx2lafw diff --git a/science/silo/Makefile b/science/silo/Makefile index 3838ed19a5d6..c17e6b68d35e 100644 --- a/science/silo/Makefile +++ b/science/silo/Makefile @@ -7,6 +7,7 @@ MASTER_SITES= http://wci.llnl.gov/content/assets/docs/simulation/computer-codes/ MAINTAINER= dbaio@FreeBSD.org COMMENT= Mesh and field I/O library and scientific database +WWW= https://wci.llnl.gov/simulation/computer-codes/silo LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/simbody/Makefile b/science/simbody/Makefile index 2242398d379a..83e815429162 100644 --- a/science/simbody/Makefile +++ b/science/simbody/Makefile @@ -9,6 +9,7 @@ PATCHFILES= 1b306f66bcd15e9bf6b27882e2daa6375ac4cd2e.patch:-p1 MAINTAINER= yuri@FreeBSD.org COMMENT= Multibody dynamics library for (bio)mechanical systems simulation +WWW= https://simtk.org/projects/simbody LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/simgrid/Makefile b/science/simgrid/Makefile index 457a435ebfe1..d1737ab7fb79 100644 --- a/science/simgrid/Makefile +++ b/science/simgrid/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Simulator of the behavior of large-scale distributed systems +WWW= https://simgrid.org/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE-LGPL-2.1 diff --git a/science/simint/Makefile b/science/simint/Makefile index 21c7f2226a1b..af2030bb3307 100644 --- a/science/simint/Makefile +++ b/science/simint/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.bennyp.org/research/simint/download/ MAINTAINER= yuri@FreeBSD.org COMMENT= Obara-Saika (OS) method of calculating electron repulsion integrals +WWW= https://www.bennyp.org/research/simint/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/simlib/Makefile b/science/simlib/Makefile index 3ae6c5f69faa..a9aab480172a 100644 --- a/science/simlib/Makefile +++ b/science/simlib/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.fit.vutbr.cz/~peringer/SIMLIB/source/ MAINTAINER= ports@FreeBSD.org COMMENT= SIMulation LIBrary for C++ programming language +WWW= https://www.fit.vutbr.cz/~peringer/SIMLIB/index.html.en LICENSE= LGPL20 diff --git a/science/simple-dftd3/Makefile b/science/simple-dftd3/Makefile index 2bc5817146c4..945c727f0782 100644 --- a/science/simple-dftd3/Makefile +++ b/science/simple-dftd3/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Reimplementation of the DFT-D3 program +WWW= https://github.com/awvwgk/simple-dftd3 LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/simsmith/Makefile b/science/simsmith/Makefile index 34ce3cd965ac..7fef442bae96 100644 --- a/science/simsmith/Makefile +++ b/science/simsmith/Makefile @@ -10,6 +10,7 @@ EXTRACT_ONLY= MAINTAINER= hamradio@FreeBSD.org COMMENT= Java-based Smith Chart program +WWW= http://ae6ty.com/Smith_Charts.html USE_JAVA= yes JAVA_RUN= yes diff --git a/science/sirius/Makefile b/science/sirius/Makefile index d0f518121fdb..454f3b900cf0 100644 --- a/science/sirius/Makefile +++ b/science/sirius/Makefile @@ -9,6 +9,7 @@ PATCHFILES= c45ef15637958885b1b299c09ec1bf9376e50ecc.patch:-p1 # https://github. MAINTAINER= yuri@FreeBSD.org COMMENT= Domain specific library for electronic structure calculations +WWW= https://github.com/electronic-structure/SIRIUS LICENSE= BSD2CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/smoldyn/Makefile b/science/smoldyn/Makefile index 728ebfcd9683..a58d63dfaa30 100644 --- a/science/smoldyn/Makefile +++ b/science/smoldyn/Makefile @@ -5,6 +5,7 @@ MASTER_SITES= https://www.smoldyn.org/ MAINTAINER= yuri@FreeBSD.org COMMENT= Biochemical simulator for molecular diffusion, surface interactions +WWW= https://www.smoldyn.org/ LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/License.txt diff --git a/science/sparta/Makefile b/science/sparta/Makefile index 195d1649312d..6b8389a9d6bc 100644 --- a/science/sparta/Makefile +++ b/science/sparta/Makefile @@ -5,6 +5,7 @@ PKGNAMESUFFIX= -dsmc # Direct Simulation Monte Carlo MAINTAINER= yuri@FreeBSD.org COMMENT= Gas simulator: SPARTA DSMC software package +WWW= https://sparta.sandia.gov/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/../LICENSE diff --git a/science/spglib/Makefile b/science/spglib/Makefile index b79425cd2835..dd68978e04ff 100644 --- a/science/spglib/Makefile +++ b/science/spglib/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= C library for finding and handling crystal symmetries +WWW= https://spglib.github.io/spglib/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/step/Makefile b/science/step/Makefile index 6445b08f118b..8dd1c86b12eb 100644 --- a/science/step/Makefile +++ b/science/step/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science education kde kde-applications MAINTAINER= kde@FreeBSD.org COMMENT= KDE interactive physics simulator +WWW= https://edu.kde.org/step LIB_DEPENDS= libcln.so:math/cln \ libgsl.so:math/gsl \ diff --git a/science/svmlight/Makefile b/science/svmlight/Makefile index f8b0f44f57de..b614bcf1f8f6 100644 --- a/science/svmlight/Makefile +++ b/science/svmlight/Makefile @@ -16,6 +16,7 @@ LICENSE_PERMS= # none MAINTAINER= ports@FreeBSD.org COMMENT= Implementation of Support Vector Machines (SVMs) in C +WWW= https://svmlight.joachims.org/ CFLAGS+= -fPIC -fcommon MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" LD="${CC}" LFLAGS="${CFLAGS}" diff --git a/science/tblite/Makefile b/science/tblite/Makefile index 8c911f595f4a..4ad06241f5a6 100644 --- a/science/tblite/Makefile +++ b/science/tblite/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Light-weight tight-binding framework +WWW= https://github.com/tblite/tblite LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/teem/Makefile b/science/teem/Makefile index e3a027bf266e..7db7d740e88e 100644 --- a/science/teem/Makefile +++ b/science/teem/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${DISTVERSION}/ MAINTAINER= yuri@FreeBSD.org COMMENT= Libraries for representing, processing and visualizing scientific data +WWW= http://teem.sourceforge.net/ LICENSE= LGPL21 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/tfel-edf/Makefile b/science/tfel-edf/Makefile index 33c0d046fc79..665e93260bae 100644 --- a/science/tfel-edf/Makefile +++ b/science/tfel-edf/Makefile @@ -6,6 +6,7 @@ PKGNAMESUFFIX= -mfront-edf MAINTAINER= thierry@FreeBSD.org COMMENT= Code generation tool dedicated to material knowledge +WWW= http://tfel.sourceforge.net/ LICENSE= GPLv3 diff --git a/science/tfel/Makefile b/science/tfel/Makefile index efffdeb5237c..cf9dde10e2c9 100644 --- a/science/tfel/Makefile +++ b/science/tfel/Makefile @@ -7,6 +7,7 @@ PKGNAMESUFFIX= -mfront MAINTAINER= ports@FreeBSD.org COMMENT= Code generation tool dedicated to material knowledge +WWW= https://github.com/thelfer/tfel LICENSE= GPLv3 diff --git a/science/thermofun/Makefile b/science/thermofun/Makefile index f739e9cbfc30..bcf9bacbf96c 100644 --- a/science/thermofun/Makefile +++ b/science/thermofun/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science # chemistry MAINTAINER= yuri@FreeBSD.org COMMENT= Code for calculating thermodynamic properties of materials +WWW= https://github.com/thermohub/thermofun LICENSE= LGPL3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/tinker/Makefile b/science/tinker/Makefile index 25c11cd6a6e6..47e41ca83976 100644 --- a/science/tinker/Makefile +++ b/science/tinker/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://dasher.wustl.edu/tinker/downloads/ MAINTAINER= yuri@FreeBSD.org COMMENT= General purpose molecular modelling package +WWW= https://dasher.wustl.edu/tinker/ LICENSE= TINKER LICENSE_NAME= TINKER license agreement diff --git a/science/trilinos/Makefile b/science/trilinos/Makefile index 17ce67d3133f..d113106d4211 100644 --- a/science/trilinos/Makefile +++ b/science/trilinos/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science # physics MAINTAINER= yuri@FreeBSD.org COMMENT= Solver for multi-physics engineering and scientific problems +WWW= https://trilinos.github.io/ LICENSE= BSD3CLAUSE LGPL20 # Trilinos is licensed on a per-package basis. Most packages are under a BSD license, some are published under the (L)GPL. LICENSE_COMB= multi diff --git a/science/tweedledum/Makefile b/science/tweedledum/Makefile index ce6bfa4b34fa..7abd175216fc 100644 --- a/science/tweedledum/Makefile +++ b/science/tweedledum/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science python # quantum-computing MAINTAINER= yuri@FreeBSD.org COMMENT= Library for analysis, compilation, synthesis of quantum circuits +WWW= https://github.com/boschmitt/tweedledum LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/udunits/Makefile b/science/udunits/Makefile index 6a4d75533e66..eaeaef45c285 100644 --- a/science/udunits/Makefile +++ b/science/udunits/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= ftp://ftp.unidata.ucar.edu/pub/udunits/ \ MAINTAINER= sunpoet@FreeBSD.org COMMENT= Library for manipulating units of physical quantities +WWW= https://www.unidata.ucar.edu/software/udunits/ LICENSE= UCAR_UNIDATA LICENSE_FILE= ${WRKSRC}/COPYRIGHT diff --git a/science/ukrmol+/Makefile b/science/ukrmol+/Makefile index ca7ccd92f300..36c82f92da71 100644 --- a/science/ukrmol+/Makefile +++ b/science/ukrmol+/Makefile @@ -9,6 +9,7 @@ DISTFILES= ukrmol-out-${DISTVERSION}${EXTRACT_SUFX}:out \ MAINTAINER= yuri@FreeBSD.org COMMENT= Code to compute electron and positron scattering from molecules +WWW= https://zenodo.org/record/5799134 #.Yo1lCknMKV4 LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/v_sim/Makefile b/science/v_sim/Makefile index ebbb99fe6e0f..722d0e2e2eb3 100644 --- a/science/v_sim/Makefile +++ b/science/v_sim/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= https://gitlab.com/l_sim/${PORTNAME}/-/archive/${PORTVERSION}/ MAINTAINER= thierry@FreeBSD.org COMMENT= Visualization of atomic structures +WWW= https://gitlab.com/l_sim/v_sim LICENSE= CeCILL LICENSE_NAME= CeCILL diff --git a/science/vipster/Makefile b/science/vipster/Makefile index 3be42027cc1f..26405e2fb1f1 100644 --- a/science/vipster/Makefile +++ b/science/vipster/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Crystalline and molecular structure visualisation program +WWW= https://sgsaenger.github.io/vipster/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/vmd/Makefile b/science/vmd/Makefile index bc0de1d04b46..7ef3fc782db0 100644 --- a/science/vmd/Makefile +++ b/science/vmd/Makefile @@ -12,6 +12,7 @@ DISTFILES= ${VMD_DIST} \ MAINTAINER= ports@FreeBSD.org COMMENT= Molecular visualization program +WWW= http://www.ks.uiuc.edu/Research/vmd/ LICENSE= VMD BSD3CLAUSE STRIDE LICENSE_COMB= multi diff --git a/science/voro++/Makefile b/science/voro++/Makefile index f19da404e2e6..28a07062895e 100644 --- a/science/voro++/Makefile +++ b/science/voro++/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://math.lbl.gov/voro++/download/dir/ MAINTAINER= jwb@FreeBSD.org COMMENT= Three-dimensional computations of the Voronoi tessellation +WWW= http://math.lbl.gov/voro++/ LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/votca/Makefile b/science/votca/Makefile index f9640da330c6..7699d9bdc944 100644 --- a/science/votca/Makefile +++ b/science/votca/Makefile @@ -9,6 +9,7 @@ PATCHFILES= 078c6814797749cd1b92a2b19f0302265ccf6463.patch:-p1 # fix testsuite b MAINTAINER= yuri@FreeBSD.org COMMENT= CSG and XTP: libraries for atomistic simulations +WWW= https://github.com/votca/votca LICENSE= APACHE20 diff --git a/science/wannier90/Makefile b/science/wannier90/Makefile index 5351c86a85d4..7a78d6d6e4ed 100644 --- a/science/wannier90/Makefile +++ b/science/wannier90/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Maximally-localized Wannier functions (MLWFs) and Wannier90 +WWW= http://www.wannier.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/wwplot/Makefile b/science/wwplot/Makefile index 4b6d0e8ec6c1..d8c86fcd773c 100644 --- a/science/wwplot/Makefile +++ b/science/wwplot/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Plotting tool for experimental physics classes +WWW= https://github.com/wwmm/wwplot LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE.md diff --git a/science/wxmacmolplt/Makefile b/science/wxmacmolplt/Makefile index de1693273de3..aa1f9c6a3193 100644 --- a/science/wxmacmolplt/Makefile +++ b/science/wxmacmolplt/Makefile @@ -7,6 +7,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Graphical user interface principally for the GAMESS program +WWW= https://brettbode.github.io/wxmacmolplt/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE diff --git a/science/xcfun/Makefile b/science/xcfun/Makefile index 2b57fa857a8e..fd6c84f29917 100644 --- a/science/xcfun/Makefile +++ b/science/xcfun/Makefile @@ -6,6 +6,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Exchange-correlation functionals with arbitrary-order derivatives +WWW= https://xcfun.readthedocs.io/en/latest/ LICENSE= MPL20 LICENSE_FILE= ${WRKSRC}/LICENSE.md diff --git a/science/xcrysden/Makefile b/science/xcrysden/Makefile index e8459172cb27..9369f8f711f5 100644 --- a/science/xcrysden/Makefile +++ b/science/xcrysden/Makefile @@ -6,6 +6,7 @@ MASTER_SITES= http://www.xcrysden.org/download/ MAINTAINER= yuri@FreeBSD.org COMMENT= Crystalline and molecular structure visualisation program +WWW= http://www.xcrysden.org/ LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/xdrawchem/Makefile b/science/xdrawchem/Makefile index eadef997bb91..69fa9e399fdf 100644 --- a/science/xdrawchem/Makefile +++ b/science/xdrawchem/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= yuri@FreeBSD.org COMMENT= Two-dimensional molecule drawing program +WWW= https://www.woodsidelabs.com/chemistry/xdrawchem.php LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/science/xtb/Makefile b/science/xtb/Makefile index 154974264c77..682a5b5a30c4 100644 --- a/science/xtb/Makefile +++ b/science/xtb/Makefile @@ -5,6 +5,7 @@ CATEGORIES= science MAINTAINER= jmd@FreeBSD.org COMMENT= Semiempirical Extended Tight-Binding Program Package +WWW= https://github.com/grimme-lab/xtb LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/yoda/Makefile b/science/yoda/Makefile index aa9cafe4d9b9..61ab26ea3aa0 100644 --- a/science/yoda/Makefile +++ b/science/yoda/Makefile @@ -6,6 +6,7 @@ DISTNAME= ${PORTNAME:tu}-${DISTVERSION} MAINTAINER= yuri@FreeBSD.org COMMENT= Particle physics package with classes for data analysis, histogramming +WWW= https://yoda.hepforge.org/ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/zotero/Makefile b/science/zotero/Makefile index 73c4d68920e1..2d3516ba71dd 100644 --- a/science/zotero/Makefile +++ b/science/zotero/Makefile @@ -7,6 +7,7 @@ EXTRACT_ONLY= Zotero-${DISTVERSION}_FreeBSD-${ARCH}${EXTRACT_SUFX} MAINTAINER= mikael@FreeBSD.org COMMENT= Reference management for bibliographic data and research materials +WWW= https://www.zotero.org/ LICENSE= AGPLv3 |