1 files changed, 75 insertions, 54 deletions
diff --git a/biology/fasta3/pkg-plist b/biology/fasta3/pkg-plist
index 366f41e77b71..714dfe3ad829 100644
--- a/biology/fasta3/pkg-plist
+++ b/biology/fasta3/pkg-plist
@@ -17,11 +17,38 @@ bin/tfasts%%VER%%
 bin/tfastx%%VER%%
 bin/tfasty%%VER%%
 etc/fastlibs.sample
-%%PORTDOCS%%%%DOCSDIR%%/README
+man/man1/fasta36.1.gz
+man/man1/fastf3.1.gz
+man/man1/fastf35.1.gz
+man/man1/fastm35.1.gz
+man/man1/fasts3.1.gz
+man/man1/fasts35.1.gz
+man/man1/fastx35.1.gz
+man/man1/fasty35.1.gz
+man/man1/ggsearch35.1.gz
+man/man1/lalign35.1.gz
+man/man1/map_db.1.gz
+man/man1/prfx35.1.gz
+man/man1/prss3.1.gz
+man/man1/prss35.1.gz
+man/man1/ps_lav.1.gz
+man/man1/ssearch35.1.gz
+man/man1/tfasta35.1.gz
+man/man1/tfastf35.1.gz
+man/man1/tfasts35.1.gz
+man/man1/tfastx35.1.gz
+man/man1/tfasty35.1.gz
 %%PORTDOCS%%%%DOCSDIR%%/COPYRIGHT
 %%PORTDOCS%%%%DOCSDIR%%/FASTA_LIST
+%%PORTDOCS%%%%DOCSDIR%%/README
 %%PORTDOCS%%%%DOCSDIR%%/README.versions
+%%PORTDOCS%%%%DOCSDIR%%/changes_v34.html
+%%PORTDOCS%%%%DOCSDIR%%/changes_v35.html
+%%PORTDOCS%%%%DOCSDIR%%/changes_v36.html
+%%PORTDOCS%%%%DOCSDIR%%/fasta.defaults
+%%PORTDOCS%%%%DOCSDIR%%/fasta.options
 %%PORTDOCS%%%%DOCSDIR%%/fasta_func.doc
+%%PORTDOCS%%%%DOCSDIR%%/fasta_versions.html
 %%PORTDOCS%%%%DOCSDIR%%/readme.v30
 %%PORTDOCS%%%%DOCSDIR%%/readme.v30t6
 %%PORTDOCS%%%%DOCSDIR%%/readme.v30t7
@@ -33,57 +60,51 @@ etc/fastlibs.sample
 %%PORTDOCS%%%%DOCSDIR%%/readme.v35
 %%PORTDOCS%%%%DOCSDIR%%/readme.v36
 %%PORTDOCS%%%%DOCSDIR%%/readme.w32
-%%PORTDOCS%%%%DOCSDIR%%/fasta.defaults
-%%PORTDOCS%%%%DOCSDIR%%/fasta.options
-%%PORTDOCS%%%%DOCSDIR%%/fasta_versions.html
-%%PORTDOCS%%%%DOCSDIR%%/changes_v34.html
-%%PORTDOCS%%%%DOCSDIR%%/changes_v35.html
-%%PORTDOCS%%%%DOCSDIR%%/changes_v36.html
-%%EXAMPLESDIR%%/dyr_human.aa
-%%EXAMPLESDIR%%/egmsmg.aa
-%%EXAMPLESDIR%%/gstt1_drome.aa
-%%EXAMPLESDIR%%/gtm1_human.aa
-%%EXAMPLESDIR%%/gtt1_drome.aa
-%%EXAMPLESDIR%%/h10_human.aa
-%%EXAMPLESDIR%%/hahu.aa
-%%EXAMPLESDIR%%/lcbo.aa
-%%EXAMPLESDIR%%/m1r.aa
-%%EXAMPLESDIR%%/m2.aa
-%%EXAMPLESDIR%%/mchu.aa
-%%EXAMPLESDIR%%/mgstm1.aa
-%%EXAMPLESDIR%%/ms1.aa
-%%EXAMPLESDIR%%/musplfm.aa
-%%EXAMPLESDIR%%/mwkw.aa
-%%EXAMPLESDIR%%/mwrtc1.aa
-%%EXAMPLESDIR%%/myosin_bp.aa
-%%EXAMPLESDIR%%/n0.aa
-%%EXAMPLESDIR%%/n1.aa
-%%EXAMPLESDIR%%/n2.aa
-%%EXAMPLESDIR%%/n2s.aa
-%%EXAMPLESDIR%%/n2t.aa
-%%EXAMPLESDIR%%/ngt.aa
-%%EXAMPLESDIR%%/ngts.aa
-%%EXAMPLESDIR%%/oohu.aa
-%%EXAMPLESDIR%%/prio_atepa.aa
-%%EXAMPLESDIR%%/qrhuld.aa
-%%EXAMPLESDIR%%/titin_hum.aa
-%%EXAMPLESDIR%%/xurt8c.aa
-%%EXAMPLESDIR%%/xurtg.aa
-%%EXAMPLESDIR%%/mgstm1.lc
-%%EXAMPLESDIR%%/xurt8c.lc
-%%EXAMPLESDIR%%/bovgh.seq
-%%EXAMPLESDIR%%/bovprl.seq
-%%EXAMPLESDIR%%/gst.seq
-%%EXAMPLESDIR%%/hsgstm1b.seq
-%%EXAMPLESDIR%%/humgstd.seq
-%%EXAMPLESDIR%%/mgstm1.seq
-%%EXAMPLESDIR%%/mgstm1_genclone.seq
-%%EXAMPLESDIR%%/mgtt2_x.seq
-%%EXAMPLESDIR%%/titin_hum.seq
-%%EXAMPLESDIR%%/mu.lib
-%%EXAMPLESDIR%%/n2_fs.lib
-%%EXAMPLESDIR%%/n_fs.lib
-%%EXAMPLESDIR%%/prot_test.lib
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/bovgh.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/bovprl.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/dyr_human.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/egmsmg.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/gst.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/gstt1_drome.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/gtm1_human.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/gtt1_drome.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/h10_human.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hahu.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/hsgstm1b.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/humgstd.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/lcbo.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/m1r.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/m2.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mchu.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mgstm1.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mgstm1.lc
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mgstm1.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mgstm1_genclone.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mgtt2_x.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ms1.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mu.lib
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/musplfm.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mwkw.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/mwrtc1.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/myosin_bp.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n0.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n1.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n2.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n2_fs.lib
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n2s.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n2t.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/n_fs.lib
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ngt.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ngts.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/oohu.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/prio_atepa.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/prot_test.lib
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/qrhuld.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/titin_hum.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/titin_hum.seq
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/xurt8c.aa
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/xurt8c.lc
+%%PORTEXAMPLES%%%%EXAMPLESDIR%%/xurtg.aa
 %%DATADIR%%/blosum45.mat
 %%DATADIR%%/blosum50.mat
 %%DATADIR%%/blosum62.mat
@@ -97,6 +118,6 @@ etc/fastlibs.sample
 %%DATADIR%%/pam250.mat
 %%DATADIR%%/rna.mat
 %%DATADIR%%/vtml160.mat
-%%PORTDOCS%%@dirrm %%DOCSDIR%%
-@dirrm %%EXAMPLESDIR%%
 @dirrm %%DATADIR%%
+%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%
+%%PORTDOCS%%@dirrm %%DOCSDIR%%